YALI0D16643g

Overview

Description similar to uniprot|P15625 Saccharomyces cerevisiae YFL022c FRS2 phenylalanine--tRNA ligase beta chain, cytosolic
Locus type CDS
Locus tag YALI0D16643g

Location

Species Yarrowia lipolytica Positions 2049284..2050874
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1591 (nuc.)
Previous locus YALI0D16621r Next locus YALI0D16665g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16643g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16643gYALI0D16643g_mRNA-001YALI0D16643g_CDS-001

Nucleotide sequence

 

>YALI0D16643g
ATGTCTGATCTCACGACCACAGTGCTGAAAACGCTTGCCGAGGGCCCCATCGCTGACTCG
CGGGTGGCCTTCCCCGCCCATACCACCGCCCAGTTGCAGGGCACGCTGCAGAGTCTTGCC
GGCCGAGAAATGGTGACCTACAAGGCCGTGGAGGAGGACAAGTGGGAGCTTACTGAGGAG
GGCAAGGAGATTGTGTCGCTGGGCTCGCACGAGTACCGCCTCTATGAGGAGGTGTGCAAG
GGTCTGGAGGGTTTGGAGCTGGCTGACGTGGCATCCAAGCTGGGAGCGTCGGGCAAAATT
GGCCAGCAGCGGGCTTTCAAGAACGGCTGGGTCAAGAAGGAGGGCTCCAAGCTGATCAAG
AGCAGCGACAGCGTGACTGACAAGACCGCCGAGGATCTTAAGACCATTGAGTCCACGGGC
ACCCTGGGAGACGCCAAGGAGCTGCAAGATCTTAAGAAGCGAAAGCTGATCACTAAGGTC
AAGCAGGTGTGGTTTGAGATTGAAAAGGGCCCCGAGTTTGCGCTTACCGTCAAGGAGTAC
GCCACCGACGTGACAACCGACATGATCCAGAGCGGCGCCTGGAAGGACGCGGCATTCAAG
CCCTACAACTTTGCCGCCGAGGGAGTCCAGCCCCAGTCCGGAGCGTTCCATCCTCTCAAC
AAGGTGCGGGAGGAGTTCCGACAGATTTTCTTCTCGCTGGGCTTCTCCGAAATGCCCACC
AACCAGTACGTGGACTCTGGGTTCTGGAACTTTGACACGCTGTTTGTGCCCCAGAAGCAC
CCCGCACGAGACCTCCAGGACACCTTCTACGTCAAGGATCCCAAGGAGGCGGGTCTCCCC
GAAGACATGGAGTACTGGAACAATGTCAAGAAGGTTCACGAGGACGGAGCCTACGGCTCC
ATCGGATACCGGTACGACTGGAAGCCTGAGGAGGCCCAGAAGCTAGTGCTGCGAACCCAC
ACCACTGCGGTGTCGGCCAAGATGCTGCACCAGCTCGCCAAGGACCCCAAGCCTTCCAAG
CTCTTTTCCATTGACCGAGTGTTCCGAAACGAGGCTGTGGATGCCACCCATCTGGCTGAG
TTCCATCAGGTGGAGGGAGTGGTTGCCGACTACAACCTGACTCTCGGAGACCTGATTGGC
TTCATGCAGATGTTCTTTTCGCAGATGGGCGTCAAGCAGCTGCGGTTCAAGCCCGCCTAC
AACCCCTACACCGAGCCGTCGCTGGAGATTTTCTCCTGGCACGAGGGTCTCGGCAAGTGG
GTCGAAATTGGAAACTCAGGTATGTTCCGACCGGAAATGCTGGAGGCCATGGGTCTGCCC
AAGGACCTGCGAGTTCACGGCTGGGGTCTATCGCTGGAGCGACCCACTATGATCAAGTAT
GGCGTCTCAAACATTCGAGAGCTGCTCGGTCATAAGGTATCTCTGGACTTTGTGGAGAAC
AACCCTGCTGTGCGATTGGATGAGGGTCTCAACTAAGTGCGGAGAAGAAGAGAGCAAGGG
TTGATGGTATCGTGATGCAACGACCATGTTGCGTTCGATGAAGGATAGGAGAAGTAATAG
ATGTTAGATTGAACGAGGTAGCTGGGTGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16643g_CDS-001

Protein length: 492 aa.
Product: Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase, putative

>YALI0D16643g_CDS-001 MSDLTTTVLKTLAEGPIADSRVAFPAHTTAQLQGTLQSLAGREMVTYKAVEEDKWELTEE
GKEIVSLGSHEYRLYEEVCKGLEGLELADVASKLGASGKIGQQRAFKNGWVKKEGSKLIK
SSDSVTDKTAEDLKTIESTGTLGDAKELQDLKKRKLITKVKQVWFEIEKGPEFALTVKEY
ATDVTTDMIQSGAWKDAAFKPYNFAAEGVQPQSGAFHPLNKVREEFRQIFFSLGFSEMPT
NQYVDSGFWNFDTLFVPQKHPARDLQDTFYVKDPKEAGLPEDMEYWNNVKKVHEDGAYGS
IGYRYDWKPEEAQKLVLRTHTTAVSAKMLHQLAKDPKPSKLFSIDRVFRNEAVDATHLAE
FHQVEGVVADYNLTLGDLIGFMQMFFSQMGVKQLRFKPAYNPYTEPSLEIFSWHEGLGKW
VEIGNSGMFRPEMLEAMGLPKDLRVHGWGLSLERPTMIKYGVSNIRELLGHKVSLDFVEN
NPAVRLDEGLN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG