YALI0D16489g

Overview

Description similar to uniprot|Q6C702 Yarrowia lipolytica YALI0E04851g
Locus type CDS
Locus tag YALI0D16489g

Location

Species Yarrowia lipolytica Positions 2043009..2044074
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1066 (nuc.)
Previous locus YALI0D16467g Next locus YALI0D16511r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16489g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16489gYALI0D16489g_mRNA-001YALI0D16489g_CDS-001

Nucleotide sequence

 

>YALI0D16489g
ATGAAGTTCTCCACCCTCACTCTCTCCCTCGCCTCTCTCTCTCTGGCTGCTCCCCAGTTC
CATCACCTGGACAACTCGCGAGCCCTGTCGCACGTCCACGACTACGCTTGGCCCCAGTCC
GACTACACTTACCAGCTGCACGGATACCGAAACGACCGGCGGTACGACATGACCACCGAT
GGCCAGAACCTGTACCTGGGCCACGGATCCACCGGCGACGTGAACGGCCACCGGCTGCAC
AATGTCACCGTTTACATTGACGTGAACGGTGACGTGAACATCGATGGAACCAACTACGGC
AAGAACCGTTATGTTAGCGTTGACAACAACCGACTGGTGCCTTCGACCCGAGCCAACCGA
AAGCTCAATCTACACCGAGACACGGACAACTGGCGAAACGCCGACCTGCGGTACTCTGAC
AAGAACCAGTTCCTGGCCTGTCCTGTCGACTCCAAGGGCAATGCCTATGACATTAGCTAC
GACCAGCAGTCCCACAACCACCTGCACCAAGTCTTTGTCAACAACGCCCCTTGCGCCAAC
CCCATTGCCGTCAACGTCAACGGTAACCTCAACCAGGGCTACTCCCGGTACCAGGACTCG
CGTCTGCGAGTCATTGACAACAACCGGTTCCAGAATGCCAACGTGTACCACAACGATGGC
CGGCTGATGCTCATTGACGATCGGCAGCGATCCCAGAACTACCACCCCTGGAACGGCCAG
CTGTCGTACCGAGGTCAGCTTGTGGACAACCAGGGCCGATTTGTGCGGCTCGGCAACCAG
GCTTCTCTGCAGTTCACCGATCGAAACCAGGTGCGACAGGGTCTCACTGGCTTCCAGATC
CGTGACAACCGGCTAACTTACCACAACCAGGGCTTCATTGCTTGCCAGTACGCCAATGGC
ATGTGGGAGCTGCGACCCACTGGCGTTGAGAGCGCGGCCCAGGCCTGCAACAATGCTCAG
TACGTCGAGATCGCCATGGAGTCTCTACAGTAGGTGTTTCTGTGACTTTGACTGTGACTT
TGACTGTGACTGTGACTGTTATATAACTCTCAACTCTTAACTCTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16489g_CDS-001

Protein length: 331 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D16489g_CDS-001 MKFSTLTLSLASLSLAAPQFHHLDNSRALSHVHDYAWPQSDYTYQLHGYRNDRRYDMTTD
GQNLYLGHGSTGDVNGHRLHNVTVYIDVNGDVNIDGTNYGKNRYVSVDNNRLVPSTRANR
KLNLHRDTDNWRNADLRYSDKNQFLACPVDSKGNAYDISYDQQSHNHLHQVFVNNAPCAN
PIAVNVNGNLNQGYSRYQDSRLRVIDNNRFQNANVYHNDGRLMLIDDRQRSQNYHPWNGQ
LSYRGQLVDNQGRFVRLGNQASLQFTDRNQVRQGLTGFQIRDNRLTYHNQGFIACQYANG
MWELRPTGVESAAQACNNAQYVEIAMESLQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG