YALI0D16335g

Overview

Description similar to uniprot|P50101 Saccharomyces cerevisiae YMR304w UBP15
Locus type CDS
Locus tag YALI0D16335g

Location

Species Yarrowia lipolytica Positions 2018353..2022074
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3722 (nuc.)
Previous locus YALI0D16313g Next locus YALI0D16357g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16335g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16335gYALI0D16335g_mRNA-001YALI0D16335g_CDS-001

Nucleotide sequence

 

>YALI0D16335g
ATGGTGGATGATGATTTCGGAGTCAAGTCGCTGGACTCGTCGGACAATTCGCCCGCCGAG
TCTGCCCACGACACCCACGCCGAAACTGAACACGACAAGACAAGCACCTCCGAAACGGAG
TCTGTGCCCGAGGTGGCCACAGACATTGACATGCTCAAGTCCAAGATGCACTCGACAATG
TTCGACGACGAGGCCGAGACCGACAGCGAGTTCGACTTCACGTGGGAAATCTCAGACTGG
ACCGCGCTGCCCAAACGGGTGCACTCAGACCCGTTTGTGCACAACGGCGTGCGCTACCGG
CTGCTGCTGTTCCCGCAGGGCAAGAGCCAGGGTGAGGTCTCGCTGTTTCTGGAGGCCGCG
CCCGACGTGAGCGACGGAGCGCGTGTGGATCCCGACTGGGCCGTTTGTGTCCAATTCAGC
CTGGTCATGTGGAACCCCAACGCCCCCTACATTTTCCAGAACATGGTGGCGCATCACCGG
TTCGACGCCGAAGACGGAGGCGACTGGGGCTTCTCGCGGTTCTACGACCTTCGACGACTC
GCCGCCCGCCACCTCGACACCCAACACGCGCTGCTGGAACGCAACGTGATGAACATCACC
GTGGTGGGCAGGGTATTCAAGGATCCCACCGGCGTTCTGTGGCATAACTTTCTGCGCTAC
GACTCCAAGCGTGTCACCGGCTATGTTGGCCTGCGAAACCAGGGCGCCACCTGCTATCTC
AACTCCCTGCTGCAGTCGCTCTACTTCACCAACGCCTTCCGTAAAGCGGTATTTGGTATC
CCCACCGGCGAGAACGACGCCGCCAGCGCCAAGGTGCCTCATGCTCTCCAGCGGCTGTTC
TACCAGCTACAGACGTCTGACGAGCCTGTCTCCACACTGGAGCTCACCCGGGCTTTCGGC
TGGGATTCTGCAGACGCATTCACACAGCACGACGTGCAGGAGCTGGAGCGGGTGCTGATG
GACTCGCTGGAGGGATCTATGAAGGGCACCAAGGTGGACGGTGCGCTGTCAGAGCTGTTT
GTCGGCCAGATGAAGTCGTTCATCCGGTGCATCGATGTGGATTACGAATCGTCGCGATCC
GAGGACTTTTGGGACGTTCAGCTCAACGTGAAGGGCATGCAGGGCCTCGAAACGTCGCTG
CGCAACTACATTGAGGTTGAGATGCTCGACGGCGAAAACCAGTACATGGCTGAGGGCTAT
GGGCTGCAGGACGCTCAGAAGGGTGTCTCGTTCCAGTCGTTCCCCCCAGTTCTGCATCTG
CAGCTGAAGCGGTATGAGTACGACTTTGAGCGCGACTCCATGACCAAGATCAACGAGCGA
TATGAGTTCCCCCCCTCGGTGAACCTGGCACCCTATCTTGATCGTGCCGCTGACATGTCC
GAGTCGTGGGAATACGAGCTGCATGCCGTGCTCGTGCACAGTGGCGATCTCAACACGGGT
CACTACTATGGACTACTCAAACCTGAGCGGGACTCTCCCTGGTTCAAGTTTGACGACGAC
CGTGTAACACGGGCCACCAACAAGGAGGTGTTTGAGGACAACTTTGGTGGCGACGGGCTT
CACAACCAGCACAACAAGCCGCTGTCGGCCCGACAGCAGCGCAACATGCGGTACAAGCGC
CAGACGTCGGCGTACATGCTGGTTTACATCCGAAAGAGCCGTTTGGAACAGGTGCTTGGC
AAGGTGCACGACTCGGACGTGCCGGCTCATATCCCGCAGGAGTTGAGCCAAGAGGCAGCC
GTGGAGGAGCGGCGACGTCAGGAGATGGAAGAACAGCACCTGTACATGCCCGTCAGTGTT
GCTTCCTTGTCTCAATTCCAGAGCCACCACGGTTTCGACACTGCGATCTGGTCTGGCACG
TCCCTGGACGATGCTGACCACGCCGGAGTGCCTGTGTCTGTGCGTGCTCTCAAAACCTGG
ACTCTGGCGGAGCTCCAGGCAGCCATCGCCCAACAACTGGGACTGGATGACTCTGCGCAG
ATTCGGCTCAGAGGCTGTGTGAAGCGAAAGAACGGAACCATCCGGCCAGACGCCATCATC
GTCTCTCAGTCACCCGACGAGACGCTTGAGCAGATTCGAGACAGGGTATCTACTCGAACC
CCGGAGCTTCGAGTGTACGTGGAGCAGATCTCCAGCGACACTCCTGCCCCCATGCCTACG
CAGAGCATTGTTTTTCTGAAGCATTTCGATGTGGAGACCCAGACTCTGGTGGGCGTGGGT
CATGTGCTGGTAGACTCCAGCGATACGGTGGGCTCCATCGTGCCCTACATCACCCAGTCC
ATGGGCTGGGATGCCGCTACGCCCGTCGTACTCTTTGAGGAGATCAAGCCTCGAATGATC
GACATTGTCAAACAGGACAAGACGTTTGACGAGGCCGAGATCCAGAACGGAGACATTATC
ACCTTCCAACGAAACGATGTGGCTCCTGCCGGTCGAGTGCGATGCCAGGACCCCCAGCAG
TACTACGACTTCCTCTACAGCCGACTACGGGTCAACTTTGTGTCTCGCCAGGACCCCGAG
GATGAGGATTCATGCGTGTCGTTGTGGCTGTCAAAGAAGGACTCCTATGACGATGTTGCG
GCTGCTGTGGGTGATGTTCTTGGCCATCCCGGCTCCCACATCCGTCTGTATGTGACTAAC
AGCGACGGCTCTCCTCGAGCAAGCATCAAGAGCAACTCTGGCTCTCTCTCGGCCATCATA
TCGACCAACTACGTCTCCTCGCACAACCCTCTACTTGCGTACGACATTCTGGACATGCCT
CTGGTGGAGCTGGAGACAAAGCGGAACGTGCAGGTTGTTTTTTTGCGTAACGGGCTCAGC
ACGGACGAAAAATACTCGTTCCTGCTGCCGGAAACTGGCCATGTGGGCGATATTGTGACA
TCTCTCAAGGCCCAGGCCAAGGGGCTGGAGAATGTGCCTCCCGAAGCGTTCAAGCTATGG
TTTTTCAACAACGGTCGAAACACTCAGTACTTCAGTCTGCATGAGTCTCTGAAGCGGTTT
CCCGACGACACCACGCTCCATGCAGCCGTTATGACTCCCGAGGAGCAGGCTGTTGTGAAG
CACGAGGAACAGGTGGCTAGCCACGTCCCGCAGGTGGACACTGTGGACGAAAATGGTACT
GTTGTCATGGCTCCCACTCCCGAGATCCCAGCTTGTCCCTACAAGTGGGTTCATTGCTTC
CATTTCTGGAAGGATCCTATGCGACCCCATTCCATTCCTTTTTCGTTTGCGGCTGCCCAA
GGCGAGCTGTGGCCCGATACCAAGCTGCGGCTCAAGCAGGTGACTGGTTACTCCGATCAG
GTGTTTGACAAGATCAAGTTTGCAATTGTGAGGGACGATTCGTACGCCGAGCCCCACTAC
TTTGGCGATGAGGACGAGTTGTATGCCATGGTTGGCGACAACTTGTTGCTGGGTTTGGAT
CATGTGGACAAGACGCCATACAAGAAGGGCTACGGTGAACGGGCTATTTTCATCAACAAG
TGAACGTCTTTGAAGGGTCCAAGTCTCAGGTCTGTGGAGGCTAGCAAGGAGGTCTAAAGT
GACTCTCGACAAGTGAAGTAATTCATGATGTGATTTATGTGTTCAGGGGTAGAGTGTAGC
GGGAGATACTAGTTCGAGTACAACAAGTACGCGTACTCTGTAATCTTTTTGTGAATCAGT
GTAGTTTTCTACGATAGTACTCACTCGTACCCTGATGTATTCAATTCAAGTCGCCCACCA
TT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16335g_CDS-001

Protein length: 1161 aa.
Product: Ubiquitin-specific protease involved in protein deubiquitination, putative

>YALI0D16335g_CDS-001 MVDDDFGVKSLDSSDNSPAESAHDTHAETEHDKTSTSETESVPEVATDIDMLKSKMHSTM
FDDEAETDSEFDFTWEISDWTALPKRVHSDPFVHNGVRYRLLLFPQGKSQGEVSLFLEAA
PDVSDGARVDPDWAVCVQFSLVMWNPNAPYIFQNMVAHHRFDAEDGGDWGFSRFYDLRRL
AARHLDTQHALLERNVMNITVVGRVFKDPTGVLWHNFLRYDSKRVTGYVGLRNQGATCYL
NSLLQSLYFTNAFRKAVFGIPTGENDAASAKVPHALQRLFYQLQTSDEPVSTLELTRAFG
WDSADAFTQHDVQELERVLMDSLEGSMKGTKVDGALSELFVGQMKSFIRCIDVDYESSRS
EDFWDVQLNVKGMQGLETSLRNYIEVEMLDGENQYMAEGYGLQDAQKGVSFQSFPPVLHL
QLKRYEYDFERDSMTKINERYEFPPSVNLAPYLDRAADMSESWEYELHAVLVHSGDLNTG
HYYGLLKPERDSPWFKFDDDRVTRATNKEVFEDNFGGDGLHNQHNKPLSARQQRNMRYKR
QTSAYMLVYIRKSRLEQVLGKVHDSDVPAHIPQELSQEAAVEERRRQEMEEQHLYMPVSV
ASLSQFQSHHGFDTAIWSGTSLDDADHAGVPVSVRALKTWTLAELQAAIAQQLGLDDSAQ
IRLRGCVKRKNGTIRPDAIIVSQSPDETLEQIRDRVSTRTPELRVYVEQISSDTPAPMPT
QSIVFLKHFDVETQTLVGVGHVLVDSSDTVGSIVPYITQSMGWDAATPVVLFEEIKPRMI
DIVKQDKTFDEAEIQNGDIITFQRNDVAPAGRVRCQDPQQYYDFLYSRLRVNFVSRQDPE
DEDSCVSLWLSKKDSYDDVAAAVGDVLGHPGSHIRLYVTNSDGSPRASIKSNSGSLSAII
STNYVSSHNPLLAYDILDMPLVELETKRNVQVVFLRNGLSTDEKYSFLLPETGHVGDIVT
SLKAQAKGLENVPPEAFKLWFFNNGRNTQYFSLHESLKRFPDDTTLHAAVMTPEEQAVVK
HEEQVASHVPQVDTVDENGTVVMAPTPEIPACPYKWVHCFHFWKDPMRPHSIPFSFAAAQ
GELWPDTKLRLKQVTGYSDQVFDKIKFAIVRDDSYAEPHYFGDEDELYAMVGDNLLLGLD
HVDKTPYKKGYGERAIFINK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG