YALI0D16291g

Overview

Description similar to uniprot|P53893 Saccharomyces cerevisiae YNL163c translation elongation factor eEF4
Locus type CDS
Locus tag YALI0D16291g

Location

Species Yarrowia lipolytica Positions 2010641..2013731
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3091 (nuc.)
Previous locus YALI0D16281r Next locus YALI0D16313g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D16291g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D16291gYALI0D16291g_mRNA-001YALI0D16291g_CDS-001

Nucleotide sequence

 

>YALI0D16291g
ATGACGTTATCGCCCCTACAACTTCGCAAGCTGCAATCGGACCCGTCGTCGATCCGAAAC
ATCTGCATTCTGGCCCACGTGGACCACGGCAAGACCTCGCTCAGCGATTGCCTGCTTGCC
TCCAACGGCATCATCTCTCAGAAGATGGCTGGAAAACTGCGGTATCTGGACTCGCGACCG
GACGAGCAGGAGAGAGGCATCACCATGGAGTCATCTGCCATCTCGCTTCACTTCCGAACC
TTCAGAAGAGATCCCAGCTCGACGGAAGAACCGCCCAAAATGGTGCCCAAGGACTTTCTC
ATCAACCTGGTGGACTCTCCAGGCCATATCGACTTTTCCAGCGAAGTGTCCACGGCGTCG
CGATTGTGCGATGGAGCGGTGGTGCTGGTTGACGCCGTTGAGGGAGTCTGCAGTCAAACG
GTGACGGTTCTGCGACAGGCGTGGATGGAGCAGCTCAAGCCCATTCTGGTGATCAACAAG
ATTGACCGACTGGTGGAGGAGCTACAATTGACTCCCGCCGAGGCCTTCACACACCTCAAG
AAGCTCATTGAGGGTGTCAACGTTGTTCTGGGCGGATTCTACGCCTCCAACCGAATGGCT
GCCGACCTCGAATGGCGGGAGAGCGGAAAGACAGGCACCTTCGAAGACGAAGACGACAGT
GAACTCTACTTTTCGCCCGAAAAAAACAATGTCATTTTTGCATCAGCCATCGACGGCTGG
GGATTCACCGTCGCCCAGTTTGTCGCCATCTACGCTGCCAAACTCGGAATGAAACGAGAA
AACCTCCAAAAGTGTCTGTGGGGAGACTTTTACTTTGACCCCAAGACCAAGTCGGTCATA
ACCAGCAAGGGGCTCAAGGGCCGGAATCTGAAACCGCTCTTTGTGCAGCTAGTTCTGGAC
AACATCTGGGCCGTGTATCACTGCACGGTGATTGAGCGGGACGCCGACAAGAGCGCCAGG
ATCATCAAGGCCCTGGAGCTCAAGATTTCGCCCCGAGACCTCAACTCCAAGGACGCTCGG
AACCTGCTGACCACCATCTTCCAGCAGTGGGTGCCTCTTTCTGTGTCCGTTCTACATTCC
GTGGTTGACAAGTTGCCCGATCCAATTGTGGCCCAGGGCAAGCGAATGCCGGCAATTCTA
AAATCCGTTGGTTATCCCGATCAAGAAGGCAATGGCGAAAACGAGGAAACCGTGTCTCAG
GGCATGCTCACGTGCTCCACCAAGGCTCCACTGGTGGCCTACATCAGTAAGGTGGTTTCT
ATCCCGGAGGCTGATCTGCCCAAGAACCAAAAGGTGATGAAATCCATCGACCAGCTTCGA
GAGCAATCTCGATTGGCAAGAGAGAAAATTGAGAACGGACAGACTGACGAGTCATCGGCT
GCCGCTGAAGCTGCTCCCAAAGATGAAGTTGACGATCTCACTGCAGCATACTCTTCTTAT
GACTACGAGGAGGACTTCGATATTGGCGAGTCCAACTACGTTCCTCCTCCTCCCGAAGTT
CTCATTGGTTTCGTCCGAGTCTACTCCGGTGTCATTCGAACCGGGCAGAAGGCCACAGTT
CTGGGACCCAAGTACAACCCTGCCGAGCCTTCTAAGCACGTGCTTGAGGTGGAGATCACC
GATCTTTACCTTCTGATGGGCCGAGAGCTCGTGACTATCGACCATGCCCCTGCTGGAGGT
ATTGTGGGTATTGGAGGTCTTGATGGTGAGTTTCTGAAATCCGGCACTCTCGTCTCTGAC
CAGTTCCGAGGCCCCAATCTCGCGGCGGTGGAGGGATCCATGACCACACCCATTGTGCGA
GTTGCATTGGAGCCCGAAGACCCCACCCAGATGTCGCATCTTGAGGAAGGTCTCAAGCTG
CTCAACCAGTCCGATCCCTGTGTGCAGGTGCATCTTCAGGATACTGGTGAGCACGTGATT
TCGTGTGCTGGAGAGCTACATCTTGAGCGATGTCTCAAGGATCTGACTGAGCGGTTTGCC
GGCATTGAGATTCAGGCTTCCGAGCCTATTGTTCCCTATCGAGAGTCCATTGTGGCTCAC
CAGGTTGCTCCTGGAGGCGAACCCGCTCCAATGCGAGACGCTGAACTTGGACGAGGAGTT
GTTACTCTGGAGCTCGAGGAGGAGGGCCATGTGGATCTCAAAATGCATGTGACCCCTCTT
CCTCAGGCGGTGGTGACATTTTTGATTTTCAACCGAGTCTCAGTCGCGGCTCTGGCCGGT
GTCAAGAGCGCCGAGGAGGAAACCGAGGATTCGTCAGTCAACCAGAACATTCTCAACAAG
GAGGACTTTCAGACCAAACTGGCCGAGATTCTCGAAGAGGAGAAATGCACCTTTACCGTC
GACCAGATTGTGGCTTTTGGACCCAAGCGTGTGGGTAGTAACATTCTGATCGATAATTCC
GAATCTGGTCTTCTACGACGTTTCTTTGGAGCAACCTCCGACATTTCGTTCCACCAGGAT
TCCATCCTGACTGGATTCCAGCTGGCCACTCAGTCTGGACCTCTCTGTAACGAGCCTATG
CAGGGGGTGGCAGTCTATCTTGATCTCATTGACGACCCCAACGATGAGCTGGCCGGCAAG
CTCATATCTCCCTTTCAAAAGGCAATCTACACTGCCTTTTTAGACTGGTCGCCCCGTCTC
ATGTTGGCCACCTACTCGTGTGAGATCCAGGCGTCCACCGAGGTGCTGGGTAAGGTATAC
TCTGTGGTTACTCGGCGTAAGGGTAAGATTGTGAGTGAGGAGATGAAGGAGGGCACTCCA
TTTTTCACCATTTCTGCCACCATTCCCGTGGTTGAAGCATTTGGCTTTGCTGAGGAGATC
CGAAAACGAACCTCTGGAGCAGCCCAGCCCCAGCTCATTTTCGCAGGCTACGAAACTTTC
GATATGGATCCCTTCTGGGTGCCCACGACTGAGGAAGAGCTGGAGGAGCTGGGAGAGACG
GCCGATCGAGAAAATGTCGCCCGACGGTACGTGGACAATGTGCGGGCTCGAAAGGGTCTC
TACGTGGAAAAGAAGCTCGTTGATGGAGCCAATCGACAGCGAAACCTGAAGAAGTAATGT
ATAGATATGATAATGTATAGATATCGGGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D16291g_CDS-001

Protein length: 1019 aa.
Product: Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, putative

>YALI0D16291g_CDS-001 MTLSPLQLRKLQSDPSSIRNICILAHVDHGKTSLSDCLLASNGIISQKMAGKLRYLDSRP
DEQERGITMESSAISLHFRTFRRDPSSTEEPPKMVPKDFLINLVDSPGHIDFSSEVSTAS
RLCDGAVVLVDAVEGVCSQTVTVLRQAWMEQLKPILVINKIDRLVEELQLTPAEAFTHLK
KLIEGVNVVLGGFYASNRMAADLEWRESGKTGTFEDEDDSELYFSPEKNNVIFASAIDGW
GFTVAQFVAIYAAKLGMKRENLQKCLWGDFYFDPKTKSVITSKGLKGRNLKPLFVQLVLD
NIWAVYHCTVIERDADKSARIIKALELKISPRDLNSKDARNLLTTIFQQWVPLSVSVLHS
VVDKLPDPIVAQGKRMPAILKSVGYPDQEGNGENEETVSQGMLTCSTKAPLVAYISKVVS
IPEADLPKNQKVMKSIDQLREQSRLAREKIENGQTDESSAAAEAAPKDEVDDLTAAYSSY
DYEEDFDIGESNYVPPPPEVLIGFVRVYSGVIRTGQKATVLGPKYNPAEPSKHVLEVEIT
DLYLLMGRELVTIDHAPAGGIVGIGGLDGEFLKSGTLVSDQFRGPNLAAVEGSMTTPIVR
VALEPEDPTQMSHLEEGLKLLNQSDPCVQVHLQDTGEHVISCAGELHLERCLKDLTERFA
GIEIQASEPIVPYRESIVAHQVAPGGEPAPMRDAELGRGVVTLELEEEGHVDLKMHVTPL
PQAVVTFLIFNRVSVAALAGVKSAEEETEDSSVNQNILNKEDFQTKLAEILEEEKCTFTV
DQIVAFGPKRVGSNILIDNSESGLLRRFFGATSDISFHQDSILTGFQLATQSGPLCNEPM
QGVAVYLDLIDDPNDELAGKLISPFQKAIYTAFLDWSPRLMLATYSCEIQASTEVLGKVY
SVVTRRKGKIVSEEMKEGTPFFTISATIPVVEAFGFAEEIRKRTSGAAQPQLIFAGYETF
DMDPFWVPTTEEELEELGETADRENVARRYVDNVRARKGLYVEKKLVDGANRQRNLKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG