YALI0D15928g

Overview

Description some similarities with uniprot|P53857 Saccharomyces cerevisiae YNL234w
Locus type CDS
Locus tag YALI0D15928g

Location

Species Yarrowia lipolytica Positions 1970016..1971610
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1595 (nuc.)
Previous locus YALI0D15906g Next locus YALI0D15939t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15928g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15928gYALI0D15928g_mRNA-001YALI0D15928g_CDS-001

Nucleotide sequence

 

>YALI0D15928g
ATGAAGAATAGCGAAGCAGCAGAAAAGTCAGGAAACGCGATCGGGGAGAGATACTATGCT
GGCGCATTACAAGACGCACCAAGACGCACGCCATCGTTTGAAACGCCGCCGTTTGCACCT
CCCTATCCGCCGTCACGCACCTCATCCATCTCGTCGCTTTCGTCCAGCCTCGGCCGCTTC
TCCAAGCTACCACTGATTCCCCGACGTACCTCTGCAGCAGGTCCAGGTCAATCTGTAGAG
TCGCCCTTAAAAACCATGGGCGTGCATGTTCGCGACGACTCCGTTTACAGCCATAGCTCC
AAAAAAATGACCGACATTGACGGATACTCTCAGTCCCAACGGGACTTTTACACAATCAAG
CCGCACCTGTACGCCCAGCAACCAGTCAAGAACTCCCAGGGCCCTCAGCCGTTCAATGTC
AACCCCAACGATGCCAGAGAGACCAGAACCAATGGCTCCATGACCCCCACAAACCTGGCT
CGACCATCCCAGGTGAAGGTCGTCTTCGACATGACTAAAGAAGAAATCGAACTCACCCAA
AAGCTGTGGTCGGATCTTATGAGCGACCCCGAGTCTCTGGAACAAAGTACGGCCTATGGA
ACCCCCACCGCGCTCTTCTGCGAGCAGTTCTACACCAACCTGATGGCCTCCCACGCAGAG
CTCGCGTCCATCTTCCCTTCCATCAAGAGACAATCCGTGGCGGTCGCGGGCGTGTTTGGA
CTCGCTATCAGTTCGCTCGAGAGGATTGAAGAGATGGACGAATTCCTGCGGTCGGTGGGA
AAACGACACAACCGAATGATCGGTGTCGAACCCATCCACTACCGATGGCTAGGAGAAGCC
ATGGTCAAGACCTTTGCCGACCGGTTCGGAGACAGATTTACGCTGGAGGTGGAGACCGCC
TGGATCAAAATTTACTCCTACCTGGCCCACAAACTGCTGGCCTCCGACGAGGAGCCTAAC
GTGCTCATGTTCGCGCCCCAGCAACAACCCCGTTCCATGCTGTCCTCATCTCCTAATGGA
CCGGGTATCTCCCCCACTCCTTCGTACACTAGCTACCAAACCACCCAAGACGTACGGAAA
CCCAGCCTTTCCAGCTCAATCAACTCTCAGTCGCTCTACACCTCCACATCCAACAACTCC
ACCGCTCCTACTTCTGTGGTGAACTCGCCTAACGCCCCCTCTATTCCAGCCACTCCCACA
GCTAACAATGCCCCAATCATCTCGGCCCGACGAAACGTCTCAACTACTCCTTCAATTCCC
CCCTCTCTTCCCTCTGCTCCTGCCCCTACACCTAAAGCTACCGACTACTCCCCCCCAAAG
AACGTGCGAGGGAACGGTGGAAGAAAGCAGGGACGAAAGGGCAAGGACGGTGAAAAGTGT
GTCTTAGCCTAAGGAAAATCGACCCACTTCTGCCCTGGTGGCTTTTGTGACTTTTCCCAG
TGGGTCTTGTGACTGTACCCAAAACTCGTGTCTAGAGTAATGATGGTCAGAACCCCAACA
ACATGATATTAATCTTACAGTCATATACACAGTCATATCGATTTACATAAATGTCTTGGA
TTGTGTGTAGCATTAAATCTCGGACCGTTATCTCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15928g_CDS-001

Protein length: 464 aa.
Product: Conserved hypothetical protein

>YALI0D15928g_CDS-001 MKNSEAAEKSGNAIGERYYAGALQDAPRRTPSFETPPFAPPYPPSRTSSISSLSSSLGRF
SKLPLIPRRTSAAGPGQSVESPLKTMGVHVRDDSVYSHSSKKMTDIDGYSQSQRDFYTIK
PHLYAQQPVKNSQGPQPFNVNPNDARETRTNGSMTPTNLARPSQVKVVFDMTKEEIELTQ
KLWSDLMSDPESLEQSTAYGTPTALFCEQFYTNLMASHAELASIFPSIKRQSVAVAGVFG
LAISSLERIEEMDEFLRSVGKRHNRMIGVEPIHYRWLGEAMVKTFADRFGDRFTLEVETA
WIKIYSYLAHKLLASDEEPNVLMFAPQQQPRSMLSSSPNGPGISPTPSYTSYQTTQDVRK
PSLSSSINSQSLYTSTSNNSTAPTSVVNSPNAPSIPATPTANNAPIISARRNVSTTPSIP
PSLPSAPAPTPKATDYSPPKNVRGNGGRKQGRKGKDGEKCVLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG