YALI0D15862g

Overview

Description weakly similar to uniprot|P40317 Saccharomyces cerevisiae YDR006c SOK1 high copy suppressor of a cyclic AMP-dependent protein kinase
Locus type CDS
Locus tag YALI0D15862g

Location

Species Yarrowia lipolytica Positions 1951027..1953059
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2033 (nuc.)
Previous locus YALI0D15840g Next locus YALI0D15873g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15862g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15862gYALI0D15862g_mRNA-001YALI0D15862g_CDS-001

Nucleotide sequence

 

>YALI0D15862g
ATGGCGGCAGCACCATTTATAAGGAGGCGACAGGTAGGTCGACTGCACCATCAAGCCGAA
AGAGACATGGACCAGATATATACGGACGACGAAACCAGTGATAGACGACAAGCCACTCGA
GGCTCCACTGCCACGACAACCCGACGATGCTCACGACATGTCCCGGGCCCTGCTGCTACC
GCCGTTGCCGCCCATGCTGCCGCAGCTGCCGCCGCTGCTACAGCAACACACAACTCCACG
CCTGACGATGAGACGCAACCGTCGAAAAAGGTGAAGCTGGACGGAGTTCGTACGTGGGCT
CGAAGTCGCTCGCTGCCCATCATTGACCGAGAAGCCAGTGCCACGGCCTCAGCTTCTGCT
GCCGGTCATGTGACCCACATGAACCATGTGATTAGTCAGCCCACTGTGAACCACTTCAAC
CCCGCCTTTAACGGCAACAGCTTTGGTGGTAGCAAGCGAAAGCGGGAGGAGGAAGCCGTT
TCTCCCGTTGCTGCCTCCGCAGCACCTACGAAAATTAGTAACAGTAACACTCGACCTGCA
TCTGCTGCCCCGTTTGGCAGTAGCACCAAAATCTCTGCAGTTAAGCCTGCCACAAAGAGC
TCTACTACAACAACTGCCACCGCTCCTCTGCCACCAGTAAACATCAACTCGCTGCGGGAA
ATCGATCTTGCCGAAATCTTCAAAAACCCCCGCCTGCGCCACGACATTGTGTTCGATCCT
CAACTGCAGTTCCGCCCCAATTTGGACGGCGAGCGAGGCAAGAGAAAGCGACAAAGCACA
CAGCGATATTGGGACGGTATTACCGCTGAGGTTGAGGGAGTGTGGGCCGCAGCCGACTCT
GCTCAGCCATGCACCTCGCATTTTGGCACCCTCACAACTCTCTTCACTACTCTGCGACAG
GTGCTGGTGTCTCTGCTGCCTGTCAAGGACCGCGAGACAATCGAATCTGACCTGGACTCA
GACCTAGTGCAGCAGCAGCTGTGCCACCACTGCTTTGACTTTGTGTCCTTTTCGCACTGG
CTCAGCAACGTGTTCAAGGCGCACTGTGCGCCTATGCGAGACAGCTGGGTCGACCAGATG
GTGGTGCGCATCAACGCTGGCTGGAAGGAAAAGAACAGTCGTAAACTTACCGAGGGATTG
CGGATGATTTTTGCCATTTTAGAGGCCATGAAGCTCGACGTTGCAAACCACCAGATCCGG
TCACTTCGACCCATTCTGGTGGACACTGCTGTAGACTTTGAGCAGGACTACTATGAGCAG
GTGGTGGAAAAGCGACGGTTCGACATTGCCAGCAGCTGCCAGTGGTTTGCTGCTGCCGCT
GCATCGACCGAACGACCCGCCGCTGCGGGCGCCACCAAGCACTACAAGACCGCCCTCATT
GGCGCAGTGACCCAGCTCATCACGTGCAGTAGCAGTGACTTCCCCGCCACCTTTGGCTTT
GACTTTGCTCGTCTGTCGGCCTTCCGATCTGACCTGCGCCAGCTGGTCTGCCTGCAGCTG
TGCTCCATGTTGCTTCAGCAATTGGTGGCCACCCGTGGTGATGCTAAGGCCAAGAAGCTG
GTTGCCGATGCCGAGTACCAGTCCAAGCTCAAGACGGACTGCCTGGCTATCGTTCTGAGC
AGCAGTGGAAACAGCAAGTGGACCAAGAACGTGTCTGGCCTTGCTCTGGAACTCGCCAAG
CGTGTGGAGGCGGTAGTCAACGAAAAACCCGCGACTCTGCCCTCGACTGAGCTCACTTCT
CTGGCCTCCAACTGGCTCACAAACAACATTCTCCCTTCGTCAGCCATGTACAAACTGGTG
GAAAAACGGCTGGTGAAGGAGATTGTGACTGGTGTGGAAATTCGAATTCTCGACACCTCT
GCTGTCTCTACTAACTCTACTTCCACAGTCACTCCTCTCATTGAAAAACTCTCTCTTTTG
ACAAAGTTCCACTGGGACGTCTTTTCAAAATATTATATTGCATATGTCGAGTCTGCCAAA
TAAAAAAAAAAAGGCAGCCGACGAAAATAAATTATTGGTTATGGGTAAACACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15862g_CDS-001

Protein length: 661 aa.
Product: Conserved hypothetical protein

>YALI0D15862g_CDS-001 MAAAPFIRRRQVGRLHHQAERDMDQIYTDDETSDRRQATRGSTATTTRRCSRHVPGPAAT
AVAAHAAAAAAAATATHNSTPDDETQPSKKVKLDGVRTWARSRSLPIIDREASATASASA
AGHVTHMNHVISQPTVNHFNPAFNGNSFGGSKRKREEEAVSPVAASAAPTKISNSNTRPA
SAAPFGSSTKISAVKPATKSSTTTTATAPLPPVNINSLREIDLAEIFKNPRLRHDIVFDP
QLQFRPNLDGERGKRKRQSTQRYWDGITAEVEGVWAAADSAQPCTSHFGTLTTLFTTLRQ
VLVSLLPVKDRETIESDLDSDLVQQQLCHHCFDFVSFSHWLSNVFKAHCAPMRDSWVDQM
VVRINAGWKEKNSRKLTEGLRMIFAILEAMKLDVANHQIRSLRPILVDTAVDFEQDYYEQ
VVEKRRFDIASSCQWFAAAAASTERPAAAGATKHYKTALIGAVTQLITCSSSDFPATFGF
DFARLSAFRSDLRQLVCLQLCSMLLQQLVATRGDAKAKKLVADAEYQSKLKTDCLAIVLS
SSGNSKWTKNVSGLALELAKRVEAVVNEKPATLPSTELTSLASNWLTNNILPSSAMYKLV
EKRLVKEIVTGVEIRILDTSAVSTNSTSTVTPLIEKLSLLTKFHWDVFSKYYIAYVESAK
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG