YALI0D15708g - ACD2

Overview

Description uniprot|Q6C8Y9 Yarrowia lipolytica YALI0D15708g ACD2 Acyl CoA dehydrogenase
Locus type CDS
Gene name ACD2
Locus tag YALI0D15708g

Location

Species Yarrowia lipolytica Positions 1923375..1924813
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1439 (nuc.)
Previous locus YALI0D15686g Next locus YALI0D15743t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15708g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15708gYALI0D15708g_mRNA-001YALI0D15708g_CDS-001

Nucleotide sequence

 

>YALI0D15708g
ATGTTGTCCATTCGATCCATTACCCGATCTCTCCCCATTGGCAGCCGAATCTGCCAGCAG
AGTGCCATGAAGGCCTCTACTGTGCGACCTCTCGCCTTGAGAGCTTACTCCACCCGACCC
CCTGTCACTCACTTCTCCGAGGAGGAGGAGATGTTTCGTGACATGGTTAGCAAGTTTGCT
GATGAGGTGATTGCTCCCAAGGTCCGTGAGATGGACGAGGCCGAGCAGATGGACAAGACA
ATCATCCAGGACATGTTCGACAATGGCCTTATGGGCATCGAGACTCCCGAGGAGTTCGGT
GGTGCAGGTGCCAACTTCACCTCTGCTATCATCGTCGTTGAGGAGCTTGCCAAGGTGGAC
CCCTCAGTGTCTGTGATGAACGATGTCCACAATACCCTCGTCAACACCTGCATCCGATCC
TGGGGATCCGACGCACTCCGAAACAAGTATCTCCCCCAGCTTGCTGCCCAGAAGGTCGGA
TCTTTCGCTCTTTCTGAGCCCTCTTCCGGATCTGATGCCTTCGCCATGAAGTCTCGAGCC
ACAAAGACTGACGATGGATACATTTTGAACGGTTCCAAGATGTGGATCACCAACGCTGCC
GAGGCTGAGCTTTTCATTGTTTTTGCTAATCTCGATCCCAGCAAGGGCTACAAGGGTATT
ACTGCCTTTGTTGTCGAGAAGGACATGGGAGTGCAGATTGCTAAGAAGGAGCAGAAGCTG
GGTATCCGAGCCTCTTCTACCTGCGTTCTCAACTTCGAGGACGTTTTCATTCCTAAGGAG
AACCTTCTTGGCGAGGAGGGCAAGGGCTACAAGATTGCTATCGAGTGCTTGAACGAGGGC
CGAATCGGAATTGCGGCCCAGATGCTTGGCCTTGCTGGTGGAGCTTTCAAGAAGGCTACC
GGCTATGCTTTCAACGACAGAAAGCAGTTCGGCCAGTACATCGGTGAGTTCCAGGGTATG
CAGCACCAGATTGGCCAGGCCGCTACTGAGATCGAGGCTGCTCGACTCCTGGTCTACAAC
GCTGCCCGACTCAAGGAGGCTGGCGTTCCTTTCACAAAGGAGGCTGCTATGGCAAAGCTC
TATGCTTCCCAGGTTGCAGGAAACGTCGCATCCAAGGCTGTCGAATGGATGGGTGGTGTC
GGATTCACTCGAGAGGAGACTCTGGAGAAGTTCTTCCGAGATTCTAAGATCGGTGCCATT
TACGAGGGAACTTCCAACATCCAGCTGCAGACTATTGCCAAGATCATCCAGAAGGAGTCT
GCCTAAGTTGGAGTGTAATTTATTTTCAAAAAAGACAACGAATGATTCTTGTATTTAAAC
GGGCCACTTGTATGATAGTTGCTTTGTTCCACCAGCGGTACGCATGTATCTGCTGCGTAA
GTATCCACACAATATTTTACACAGTGATTAATTATGAAGTATCGGTACAGGCTTTTACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15708g_CDS-001

Protein length: 422 aa.
Product: Acyl CoA dehydrogenase
Gene: ACD2

>YALI0D15708g_CDS-001 MLSIRSITRSLPIGSRICQQSAMKASTVRPLALRAYSTRPPVTHFSEEEEMFRDMVSKFA
DEVIAPKVREMDEAEQMDKTIIQDMFDNGLMGIETPEEFGGAGANFTSAIIVVEELAKVD
PSVSVMNDVHNTLVNTCIRSWGSDALRNKYLPQLAAQKVGSFALSEPSSGSDAFAMKSRA
TKTDDGYILNGSKMWITNAAEAELFIVFANLDPSKGYKGITAFVVEKDMGVQIAKKEQKL
GIRASSTCVLNFEDVFIPKENLLGEEGKGYKIAIECLNEGRIGIAAQMLGLAGGAFKKAT
GYAFNDRKQFGQYIGEFQGMQHQIGQAATEIEAARLLVYNAARLKEAGVPFTKEAAMAKL
YASQVAGNVASKAVEWMGGVGFTREETLEKFFRDSKIGAIYEGTSNIQLQTIAKIIQKES
A*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG