YALI0D15554g

Overview

Description some similarities with uniprot|P87132 Schizosaccharomyces pombe Hypothetical protein
Locus type CDS
Locus tag YALI0D15554g

Location

Species Yarrowia lipolytica Positions 1905377..1907408
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2032 (nuc.)
Previous locus YALI0D15532g Next locus YALI0D15576g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15554g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15554gYALI0D15554g_mRNA-001YALI0D15554g_CDS-001

Nucleotide sequence

 

>YALI0D15554g
ATGTCCTTAGCAGATGCACTAGAAGAAGAACGCAAGGCCGTTCTGGCTATGAACAACAGC
GGACAGCGAGGTGGTACTCAGCATCGACCAGTCAAATCCATGGTTTTGGATGAGCCTAGA
ATGCCACATGCCCATCATCGATCCAAGTCTGTTTCAACTGGCTCAGGACCTGGGTGGAAC
CAGCAGCGGCCCAATATTCTTGTTTCCGGCCCTGATGGTCTCTCGGGAGGTAACAAGTCG
CGGTCTACCTCCCCCAATGAGTCCATGTACGCCAACCCCTACAGCAACCATTCCACCACC
AGCAAAGCCGGAATGGGAGTAGGTCTTGGTCACCCTAAAGCAGGAAAGGTTGAGCCCCTT
CCATCTCACAGGCAAGCCATGAAAAACCAACTTTTCAGTCATATGGGCGGTGCCACGCCT
TTTGGGGGTTCCTCTGCTGGCAACGTCGACGATGTGCTTCTGCGCAACTTGGATCAATTG
ATGCGAAATGGCCCAGGCGCCTCTGTGCGATCGCGGTCTGCCAACGACTCCTCGCCCCGC
CATGACACTACCCTGTACCCTCCCACTGCCGGATATCGAAGCAGCAGTCGAAATGGGAGC
CGTACAGGAAGCAGGTCGGGCTCACGAGCTGGCTCTCGTAACCCATCACCTTGCCGGTCC
CCTTCGCGAGAACGATCCATTTATGATGAAGCTCTTCGTGTGGATCACGACGATGACGAT
TACTTCGACGACGACGATGATGACGATTCTGAAGACGACGACGAGGAGGACGATGACACC
GATGCATCCTCCGAAGAAGACGAAGAAGACGGATATTCTAAGAAGAAAAAGGGCAAATGG
AGTGGACTAGATACCTCGCTGGTCTCATCAAACGCCTTGTCGCTTCTGGGAGCAATGGAG
GATGAAAGAAAGTCAGTGGCGCAATCGAAGTTCCGCACAAAGTCTTTAATGGACCAGGCC
ATCGACCCTGCACACCCTCCGCCCCCTTCACACCAAGACATCGCGGCATACAGACGCCGA
ATCGTGCATCCCCACACCGCTTTTGATGCTGCAAAGCTGATCGAGCAAGATGCTAAGCTT
GGAGTAGCCCCCTACACTGGCTACAAAGAGGAGGTTAAGGATGCTGCCGCTGCAGAGACT
ATGGCCCTTACCGTATCCACCATTGCTTCTAGCGCCGCGACGAAGCGAACAATCCGTACC
ATCACAAGAGGAGATCTTCCTGGCCTGGTTGGTACTGCTATCACAACCCCCGACCCTTCC
CTTGAAGGCAACACCAGGGAGACTGAGAAAGAGACTGAAGGCGCTTCGGGCAATGCTGAA
AGGGCAGCTGGGGGAGGAGACAATGATGGGAATGGAGTACCAGACTCAGCGTCTACCGTA
CCATCGACTTCAGTGACTTCCAGTGTCGCGGCGGTACTGCCTACCCCTGTGGTCTTGCCA
TACCGACCCAAGGCCTACATGGTATGCACCGATCTCTCCCCCGAGTCAAATTACGCTCTT
GAGTGGACTGTTGGCACAGTACTGCGGGACGGATCCATCCTGTATTGTGTATGCACTTAC
CAAGAGGAGGATGGGGTGCGACCTGAGTCGGCTGAGATTGAGCGACTCAAGGCGATTGGT
GAGATCACTCATAATGTTGTGAAGCTGCTGAAGAAAACACGGCTGCAGGTCCATGTTGTT
ATTGAGGTGGTCCACTGCCGAAACGCCAAGCTCATGTTGTGCGAGATGATTGATCACGTT
TCACCTACATTGGTAGTTGTAGGGTCTCGTGGAAGATCTGCTCTTAAGGGCGTTCTTCTA
GGATCTTTCTCCAATTACATCGTCGGAAAGTCTTCGGTTCCAGTGATGGTGGCGCGACGT
CGCCTCAAGAAATCTAAGGCTCATCATGTCAACGTTCGACAGAGTAACAACCTCCGTGAA
GGACATGGTGGTCTTGGCTTGTCCGCTGCTAAGGTTGATTAGGTTGCTAGACCTTCATTT
ATTCGTCATCTCCCCTGTTGCATAACTAATACTAACGTGTTGTTTGAACCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15554g_CDS-001

Protein length: 654 aa.
Product: Conserved hypothetical protein

>YALI0D15554g_CDS-001 MSLADALEEERKAVLAMNNSGQRGGTQHRPVKSMVLDEPRMPHAHHRSKSVSTGSGPGWN
QQRPNILVSGPDGLSGGNKSRSTSPNESMYANPYSNHSTTSKAGMGVGLGHPKAGKVEPL
PSHRQAMKNQLFSHMGGATPFGGSSAGNVDDVLLRNLDQLMRNGPGASVRSRSANDSSPR
HDTTLYPPTAGYRSSSRNGSRTGSRSGSRAGSRNPSPCRSPSRERSIYDEALRVDHDDDD
YFDDDDDDDSEDDDEEDDDTDASSEEDEEDGYSKKKKGKWSGLDTSLVSSNALSLLGAME
DERKSVAQSKFRTKSLMDQAIDPAHPPPPSHQDIAAYRRRIVHPHTAFDAAKLIEQDAKL
GVAPYTGYKEEVKDAAAAETMALTVSTIASSAATKRTIRTITRGDLPGLVGTAITTPDPS
LEGNTRETEKETEGASGNAERAAGGGDNDGNGVPDSASTVPSTSVTSSVAAVLPTPVVLP
YRPKAYMVCTDLSPESNYALEWTVGTVLRDGSILYCVCTYQEEDGVRPESAEIERLKAIG
EITHNVVKLLKKTRLQVHVVIEVVHCRNAKLMLCEMIDHVSPTLVVVGSRGRSALKGVLL
GSFSNYIVGKSSVPVMVARRRLKKSKAHHVNVRQSNNLREGHGGLGLSAAKVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG