YALI0D15488g

Overview

Description weakly similar to uniprot|O14091 Schizosaccharomyces pombe General alpha-glucoside permease
Locus type CDS
Locus tag YALI0D15488g

Location

Species Yarrowia lipolytica Positions 1898765..1900418
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1654 (nuc.)
Previous locus YALI0D15466g Next locus YALI0D15510g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15488g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15488gYALI0D15488g_mRNA-001YALI0D15488g_CDS-001

Nucleotide sequence

 

>YALI0D15488g
ATGAGAGCAGTTGCCCCAGACATTGATATACAGTTATGTTCAGTATTCGTAAACTCACTG
GTACCCCATCATCATATTGAGTTCGATAAAAAAGCCCAAATGCACTCTCCATCATCATCA
AACAACATGTTCACAGGAAAATCCAATGTGTGGGGGAACAGTCAGATGACACGACTCTTT
ATTCTGACACTTACAATTGCAGGTCTGCAATTCACCTGGGGCGTGGAAATGAGTTATGTC
AATGTCTACCTGTTATCTTTGGGCATGTCCAAGTCTACCATCTCGTTAGTATGGGCAATG
GGACCCCTCGCGGGCCTTGTGACACAACCTGTGGTAGGCTTGCTGTCAGACTCTTGCACA
TCTCGATATGGAAGAAGGCGTCCGTTCATGGTTGTGGGATCGCTTTTCGTGTCTCTCTCG
CTGGTGACTATGGCATGGGCCACGGAATTATCTCCCATTCTCTTCTTTTTAAACAAGAGC
ATTTCGACTCGCGTCATTGCGGTTTTCTCTGTGTTCCTCACCGACTTTTCCATTAACACT
GTGCAAGCATGTTGTAGAGCTCTCATTGTGGATATCCTACCTGCTTCACTACAGCAAGCA
GGTAACGGGTGGGCCGCTCGTCAAACAGCGGTAGGACATCTGATTGGCTATTTTCTGGGA
TTTCTCAACTTGGTTCATATTACCAACGGATGGATGGGAGACACTCAACTCAAGTGCTTG
TGTGTTATTTCTTCTGCAGCGCTGTTACTTACTGTGGGGATAACAAGCATGCTAACAAGA
GAACAGGTTCTTGTCAAGACTGAGCAGCATGAACCTGTGACGCTAAAGAGTGTATTAAGT
CACACATGTGGAATCTTCACCACCATTTTCAAGACAGCTACCACTTTGCCTCCCAGAATG
AAGCGAATTGTCTCTGTCCAATTCTTCGCATGGTACGGATGGTTTTCGTTTTTGTACTAT
TCATCAACATGGATTGGAGAGGTGTACCAACGACAACATGGCGGGGTCGATGAAGATGGT
GATAAGGTCGGAAAGGTAGGTAGAATTGGATCAATGTCGTTGACGGTGTTCTCTGTCGTC
TCTCTAATTGCTTCCTTTGTCATGCCATTTCTGGCAACAAATACTGTGTTCAGGTATAAA
CCACGGCTGACGTCCATTTGGACTGGCGCTCACATTGTGTTTTCTCTAGCGATGTTTTCC
ACGTTGTACGTTGGATCTGTGGGCGCCGCGACTGCAGTCATAGCCTCATGTGGATATTCT
TGGGCAATCACAACTTGGGCTCCTTTCGCCTTGATGGGCGAGGAGATTCACAGGCTTGAA
GGTACACCGCTCCCCATATCACAGGAGATAAACGAAACAGACCAACTAGGTCCCAATTCC
AGTGCCACCTCCGACGCGAAGCATACAGGAGTGTTCCTTGGTATCCACAACATTGCAATC
AGTGCACCCCAATTCGTCTGCACGTTTGTGTCATCGTTTGTGTTTTTCTTGCTCGAAGGA
GAGGGGGATGGAGGCCGTGCCATTGCCGTCACGTTCCAGATCGGAGGTGTCATGACGCTG
ATAGCCGCGTATATATCGAGGGCTCTCTGAATGAAGGGGTTCGTGTACTCGATTTTTATT
CTTATTTATTATTTATTGAATCATCTGTGTAAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15488g_CDS-001

Protein length: 530 aa.
Product: Conserved hypothetical protein

>YALI0D15488g_CDS-001 MRAVAPDIDIQLCSVFVNSLVPHHHIEFDKKAQMHSPSSSNNMFTGKSNVWGNSQMTRLF
ILTLTIAGLQFTWGVEMSYVNVYLLSLGMSKSTISLVWAMGPLAGLVTQPVVGLLSDSCT
SRYGRRRPFMVVGSLFVSLSLVTMAWATELSPILFFLNKSISTRVIAVFSVFLTDFSINT
VQACCRALIVDILPASLQQAGNGWAARQTAVGHLIGYFLGFLNLVHITNGWMGDTQLKCL
CVISSAALLLTVGITSMLTREQVLVKTEQHEPVTLKSVLSHTCGIFTTIFKTATTLPPRM
KRIVSVQFFAWYGWFSFLYYSSTWIGEVYQRQHGGVDEDGDKVGKVGRIGSMSLTVFSVV
SLIASFVMPFLATNTVFRYKPRLTSIWTGAHIVFSLAMFSTLYVGSVGAATAVIASCGYS
WAITTWAPFALMGEEIHRLEGTPLPISQEINETDQLGPNSSATSDAKHTGVFLGIHNIAI
SAPQFVCTFVSSFVFFLLEGEGDGGRAIAVTFQIGGVMTLIAAYISRAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG