YALI0D15378g

Overview

Description some similarities with uniprot|Q10951 Schizosaccharomyces pombe Byr4 protein, mitosis inhibitor
Locus type CDS
Locus tag YALI0D15378g

Location

Species Yarrowia lipolytica Positions 1880896..1882840
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1945 (nuc.)
Previous locus YALI0D15367r Next locus YALI0D15400g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15378g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15378gYALI0D15378g_mRNA-001YALI0D15378g_CDS-001

Nucleotide sequence

 

>YALI0D15378g
ATGGAGAACTGGGACGACGATTTCGGCGATGAGGCAGACCTCGTGCTGCGCGCGTCTACC
TCAACGGTCTCCTCTTCCGAAGACAACGATTTTGGTGGTCTGATACACAAACTGGGCTCC
AACGCGACTTCAACCACCAAGTCGCCGATAAAACGACCTGTCACGAATATGAAGAACTTT
CGCAGTCTGGATGACATGCCGGACTTTACGACATTACAAACAGTTCTTTCCGACGACGAT
TTAGAAGGATTTGACGACTTTCCCACTATCAAGGGCAAACCGCTGACGTTGAAACCACAG
ATAAGCATACAGAAATCCAATAAAACGACACAAGGGAAGCACCAGTCGCGAGACACTGAT
TGGGGAGACGACTTTGAAGATGGATTTGATCTCCCTACAGACTTTACCCCTCTTTCCGTT
CGCAAAAAGACAATTTACCCCAGTGGCTTGGACGTTCCTGAGCCCGTGACGCCTACACGT
TCTCCATCAAAGGGCCGCGAATCGCCCTCTACGTCGATATTCTCACCCGCTTCTTCCCAC
TACTCTGAGACAGACGCGCCGGAAGGCGACATGTGCGAGGGTTTCGATTTGCCCAACCTA
GACAATATCGACCTTGGCAAGGTGTTGGAGGAACGCCAGAGAGTCGCCGAGGCGGAAGCA
GAAGCCGAGGCAGCTCAGTGGCAGCAAAAACCAGCCCAAGATGACTTCTTTGACGGAATA
GAGCTCAACGACGACTCTTTCGTGAATGTCAAGTCCACTGTCAACAAGAACATCTTGAAG
AACGGAAAGTCCGTGGGTAAGCTTCAAAAGCGGAGGGCAAGTCAGAACACCTCCGGCTCG
ACAATGCGTGGCCTATCTCACATGCCATCTTTGCCGTCGTTGAAACCAGCTTTAAGAGTC
AACCCGAGTCCAAAGCTAGCATCCAACACTAGACAAATCCGACCGGCGCAGTCCATGGTG
AACATTCGAGACCGTCGCAAACAGGACACAGTCAAGGTGGACTCGTTGGAGAGTCTTCGC
AAGTACAACACTGTGAAGACGTTGAGTCGACCCAAATCGCGAATCCAGTTCGATGGGTTT
GAGCTTGATGATCTGGATGATCTGGATGTGGCACGAGATGCCCCACGCGACTTTGGCACA
GTTACACGCGACTCCGTGAAGCCTTTGGAGGCCTACCGCGAAAGCACTGTGCGGAATCCG
ACATATGCATCCATGCTCAAGGCAAAGGGCCCTACGTCCCGTGAGAGCGGAGGGTCGCGT
GATGGGACAATCAAAGCCCGTGACCTGGGCGGTGCTGGACCACGCGATGGAGGTGGAACG
GTCAGAGTGCGTGAACCCCGGTTCCGGGCCAAACGTGGCCTCATTCGGCCGCTAGGAACT
CACTTCACACCCCCGACTAACTCTTCCATGTCGTTCAACCCTACAACGATGTTGTGGGAA
GGTAATGACGTCGATCTGAAGCGATTTGAGTCGGCTAAACCTGCTCTTCTTGCATTCAAG
TCGACTAAGGGCGCACAGGTTGTTGGAAATATGTATTTTGACCCCGTCAAGCTGTGCTGG
AAAAGCATGGAGGTGGATATTGACGAGCTTGAGGGATTGGAAGACCTGGAGGAGGAGCCC
ACTTCCATTGGTTTTGGAGGACGGGGTTTCAGTGGAGCAGCTGACGGGCATGAGTTTGAT
CTTTCTGATGAGTTTGTGTCAAAGTTGAAACATCAGGAGGAGAGATGGAACAGGAAAACA
GCTGGGTGGTTCGAAGTGGGAGCCAAGTTCGATAGAGACTATTTGTGGGATCTACGAAAG
TTGATCACCAATACCGCAAAGAAGTGAGGCGAAACGAACACAAAGAGATGACCATATTTA
TAGAGAGTATCAGTAATTTAGCTAATGAAGTTGCTGCGCATGTTTTTTTACTACATCCAC
CGAAAACATGAGCCTAGATTGCTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15378g_CDS-001

Protein length: 609 aa.
Product: Conserved hypothetical protein

>YALI0D15378g_CDS-001 MENWDDDFGDEADLVLRASTSTVSSSEDNDFGGLIHKLGSNATSTTKSPIKRPVTNMKNF
RSLDDMPDFTTLQTVLSDDDLEGFDDFPTIKGKPLTLKPQISIQKSNKTTQGKHQSRDTD
WGDDFEDGFDLPTDFTPLSVRKKTIYPSGLDVPEPVTPTRSPSKGRESPSTSIFSPASSH
YSETDAPEGDMCEGFDLPNLDNIDLGKVLEERQRVAEAEAEAEAAQWQQKPAQDDFFDGI
ELNDDSFVNVKSTVNKNILKNGKSVGKLQKRRASQNTSGSTMRGLSHMPSLPSLKPALRV
NPSPKLASNTRQIRPAQSMVNIRDRRKQDTVKVDSLESLRKYNTVKTLSRPKSRIQFDGF
ELDDLDDLDVARDAPRDFGTVTRDSVKPLEAYRESTVRNPTYASMLKAKGPTSRESGGSR
DGTIKARDLGGAGPRDGGGTVRVREPRFRAKRGLIRPLGTHFTPPTNSSMSFNPTTMLWE
GNDVDLKRFESAKPALLAFKSTKGAQVVGNMYFDPVKLCWKSMEVDIDELEGLEDLEEEP
TSIGFGGRGFSGAADGHEFDLSDEFVSKLKHQEERWNRKTAGWFEVGAKFDRDYLWDLRK
LITNTAKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG