YALI0D15114g

Overview

Description similar to uniprot|Q96UC2 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0D15114g

Location

Species Yarrowia lipolytica Positions 1840326..1842165
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1840 (nuc.)
Previous locus YALI0D15092g Next locus YALI0D15136g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15114g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15114gYALI0D15114g_mRNA-001YALI0D15114g_CDS-001

Nucleotide sequence

 

>YALI0D15114g
ATGTCACATTACATCGGAGTAGACGTCGGTACAGGCTCGGCCAGAGCTTGTCTCATGAAC
GCGGAGGGCGAAATCGTGTCGTTGGCCTCCAGAAACATCACCAAGTGGGAACCCATCCCC
GACTACATCAACCAGAGCAGCACTGAAATCTGGGAGTCTGTGTGTTTCTGCACAAAGAAG
GTGATTGAGGACAGTGGAGTGGACCCTTCCCAGGTCAAGGGTATCGGTTTTGATGCCACC
TGTTCCTTGGTGGTGCTGGATGAAGACAATAAGCCCGTTGCCGTGGGGCCCGACTTCCAC
GACTCACACCAGAACATTCTGCTGTGGATGGACCACCGAGCTGGAAAGCAAACCAAGAAG
ATCAACAAGTCCGGCTTCAAGCTCCTGAACTACGTGGGAGGACGAATGAGCGTGGAGATG
GAGATCCCCAAGATCTTGTGGCTCAAGGATAACATGCCCGAGGACGTGTTCGACAAGTGC
AAGTTCTATGATCTTCCCGACTACCTCACTCATCAGGCCACTGGCCAGGAGACCCGATCC
TTCTGTTCCATCACCTGCAAGCAGGGCTTCGAGCCTGTGGGTGTTGATGGCTCCACCGAG
GGCTGGAACCGAGACTTCCTTACTGCTATCGGACTTCCCGAGCTGATCGAGAACGACTTT
GCCAAGCTCGGAGGCTCTTTCAAGGAGCACGGAAAGAACATCTTGTCCGCTGGTGATGCC
ATTGGCCCTCTTAGCGAGGAATCAGCCAAGGAGCTGGGCCTCACCACATCCACCATTGTG
GGATCAGCTGTGATTGATGCTTACGCAGGCTGGATCGGAACTGTGGCAGCAAAGACTGAC
ATTCTCAAGGAGTCGCACCCCTCTTACACCGAGTCCATTGAGCTCGCCACCCATCGACTT
GCCGCCGTCGCAGGCACCTCCACCTGCCACCTCGTCATGTCCAAGGAGCCCATTTTTGTG
CCTGGTGTTTGGGGACCTTACAGAGACGTTCTCGAGAAGGGCTACTGGCTCGCCGAGGGT
GGCCAGTCCGCCACTGGAGAGCTTCTCCATCACATTCTCACATCTCACCCAGCTCATCTG
GAGCTGGTGGCTAAAGCTGGAGAGGCCGGTATTTCCACCTTTGACTGGCTTAATAACCGA
CTCGAAGAGATGAAGCTTGAGAAAAACGCCGGATCGCTCTTGTATCTCACACGAAACATG
TTCTTCTACGGAGATCTTCACGGCAACAGATCCCCTATTGCCGACTCTTCCATGAAGGGT
GCCTTTATTGGTCTTGATTTCGATGTTTCCCTCGATAACCTGGCCCTGCACTACCTGTGT
GCAGTGGAGTTTATTGCCCAGCAGACCCGCCAGATTGTGGAGGCCCTCAATAACGCCGGT
CACAAGGTTAACCAGATTTACCTGTCTGGAGGCCAGTGCCGAAACCACGTCTTGACGCAG
ATCATGAGTTCTGCTACTGGCTATCCTCTCATTATCCCAAAGTACATTGATGCAGCTGTT
GTGCTCGGATCGGCGATGCTTGGAGCTCGAGCTGCTCATAAGAAGGATCTCTGGGAAATC
ATGGGCGAGCTGTCCGGACCTGGTAAGGCCATTTATCCCGAGACTGACTCTCTCGATAAG
AAGATCTTGAACGCTAAATACGCCATCTTCTTGGATCAGGCGGAGACCCAGCAAAAGTAT
AGAAAGCAGGTTGCCAAGGCCTTAGGAGAGGATGAGGACGATGAAGATATTGAGAAGAAG
AAGCAGAAGACTACTTAGAGAGATCTATCTAGCTCTAGTTTCTCCGACTTGACTTCAAGC
CTCTGTATAAATGAAATTGATTAACGTATGACTTACAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15114g_CDS-001

Protein length: 586 aa.
Product: Conserved hypothetical protein

>YALI0D15114g_CDS-001 MSHYIGVDVGTGSARACLMNAEGEIVSLASRNITKWEPIPDYINQSSTEIWESVCFCTKK
VIEDSGVDPSQVKGIGFDATCSLVVLDEDNKPVAVGPDFHDSHQNILLWMDHRAGKQTKK
INKSGFKLLNYVGGRMSVEMEIPKILWLKDNMPEDVFDKCKFYDLPDYLTHQATGQETRS
FCSITCKQGFEPVGVDGSTEGWNRDFLTAIGLPELIENDFAKLGGSFKEHGKNILSAGDA
IGPLSEESAKELGLTTSTIVGSAVIDAYAGWIGTVAAKTDILKESHPSYTESIELATHRL
AAVAGTSTCHLVMSKEPIFVPGVWGPYRDVLEKGYWLAEGGQSATGELLHHILTSHPAHL
ELVAKAGEAGISTFDWLNNRLEEMKLEKNAGSLLYLTRNMFFYGDLHGNRSPIADSSMKG
AFIGLDFDVSLDNLALHYLCAVEFIAQQTRQIVEALNNAGHKVNQIYLSGGQCRNHVLTQ
IMSSATGYPLIIPKYIDAAVVLGSAMLGARAAHKKDLWEIMGELSGPGKAIYPETDSLDK
KILNAKYAIFLDQAETQQKYRKQVAKALGEDEDDEDIEKKKQKTT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG