YALI0D15048g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D15048g

Location

Species Yarrowia lipolytica Positions 1826959..1829304
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2346 (nuc.)
Previous locus YALI0D15026g Next locus YALI0D15059r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D15048g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D15048gYALI0D15048g_mRNA-001YALI0D15048g_CDS-001

Nucleotide sequence

 

>YALI0D15048g
ATGTCAGACGATGAGCTACTGCTTTACTCTTATGGACTGTTCAACACGGGCCAGAGCATC
CACAGAATCGACTGCATTCCCTGGATCGCCAACAAGTTCCCTCACCACAGCTTGAAGGAT
TGGATCACGAGGTTTTCGGAGCTACAGAGAGGATTAACCAAACGGGATTTATCAGAAAGG
GTAGAGCTCGTGAGCCAGCGATTCGACATCTCCGATTATGTCAGCCGACTGCATAAACGT
GGTATTGAGCCACACGTGGATGAGACTCTGAGTGATGGTGTTACCGAGAGCCAGGAATCG
CATGCCAACACAGCCGTATCGATGCGGCACGCGAAAGTCTCCGCGACGCCAGATGGCGAG
GAAAATCACGTGATTTCGAGCGACGACGACGATGATATTCTTGCAGCACGCCCAATACGA
GTCAAACGCAAATCTGGGGATACTTCAGCGTCTCAGGATACCCCCGAGCTTTCCGAGGCG
CAAATTAAAGCGCGGGTTGAGAAGCAGCTGTCAGAATTTGGCATTGGGCCCGACCATGCG
CGGGCCAGACAGTCGAGAGACTACGTTGAACAGGAGCTGGGTCATGTGTCTCTTGTTCAT
CATCAACTGAGTAAGCTCAAGTCTGAACTAACCAAGAAGCTCAACGATCTCGACAGAGGG
CTTGGATATGGTGGTTTCAACGGCATGAAGCCTGCTGTAGGTTTCTGGGGTAACGATGGT
ACTGCAAACGGAGGAGCTGAAGACCCTGTTGTTTCTGAAACAGATGAGATCATGGCAAAG
TTCTGGGACGCGTATGTGAGCAGAAAGGACAGAGAGCAGGGCCACAGAAATGGGTCACGT
GATGTTGGCACATTTCGTGGGCAGAAGCGGAGCTCGGCCTTGGTGCGTAACGACGAAGGG
GAAGATGACAGACTTGTCAAGAAGAAGAAAAATGGCGACGCAGGCGACCAAACTGGAGAG
AAGCCGCGTGGAAACGATTCGATCGGGAGCGCCATAAATGATGTAATCGACCTTGATGAG
GCGGATGTGGAGGGAAATGGTAAACATGATAAGGGATCGCTGGGTAACCTATCACTTGAA
GAGTCACGTGAACTGGAGAATCTTCTTCTTGCCGAATCCGATTCAGAGCTTTCAGATTTT
CCCTCTGATGTTGACGATTATGAAGAGGAGCTGGAGGTTCATGTTGCTTCTGGTGTATCA
GGTCAGGAGAATGAAGGACAGGACTCGGCAGATGTCTCGGCCTCTGCAAACTTGTCTCTT
GACGACTCTTTTGAAGAGGAAACTCAGCTGAAACCGCTACCCAAAAACTTCAAGATTATT
CCTCCTTACCAAGCAATAGAGGAGGAGGAAGATGATGAGGCAGAGGATGACGATGATGAT
GACGATAAAGACGAGAATTCACACACGGAGAGAAGTGAAGACGATGACGATTTCGAGTCG
CCAGTGGTCAGAACCATGTCTCGTAGACGGTCTGCGGGAAGACCCAACTATAAAGAGATT
CCGCCAGATTTTGATGAGTTCAACGAGGAGTCGGCTGATGAGGAGATAGCTGATGGGGGG
TCGGCAGAACAGGAAGTGACTACCAGAACTCGTCGTACCCGTGCAAGAGTCGTGTTAGAT
GTGGAATCCTCAGGAGATGACGAAGCCGAGGCAGAGTCTGCGGAAGAGACTGTGGGCAGG
AGGACTGGTCACCAGTCCCGTCAGATTGCTGTGGATGAATCAGCATCTGAGGACGAGTTG
GGATTTGAAGACGAAAGTGTCACTCTCAAACAGAAAAGTGGGCGAGCTCGAGGTAAAAAA
CCAACCAGAGGACGCTCGGGACGAACACGTGCTATCAAGTACATTCAGGAAGACAACGTT
GAAGAGGAAGAGGATGAAGAAATTGATGAGTATGAGGATGAGGATGATTCTGCCGAGGAA
ATAGTCGAGGAGACCGACCCAGAGGACATCTCAGCAGAAGAAAAGGAATACTCTGGCTTG
AAAAAAGCAGAGCGAAAAAAGCCTCATTCTTTCACAGATCTTTTTCACAACCGTGGGAAG
AACCGGGTGTCCTTATTTTCCGACTCGGGCACAGACAGTTCATCTGGATCGGACTCGGAT
GAGTTCGTGGAGATTGTGGCTGTGCCCAAGAATCAACCCAAGGTGGTGCCTCGTAAACGT
ATTGGTCCTGTGACCTCCCTTGCATCCCGTGGACGGTCACGTCGGCGACCAAAGTTTGAA
TCATCTTCTGAAGAAATCAGTGACTCAAGCGACTCCCCACAGCTGGACGATGACAGCGAC
GACGATGTTAGCCAAAGCGACTGAATAGGTATGTAATTACGGTAATAAACATTTATTTAT
TTACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D15048g_CDS-001

Protein length: 768 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D15048g_CDS-001 MSDDELLLYSYGLFNTGQSIHRIDCIPWIANKFPHHSLKDWITRFSELQRGLTKRDLSER
VELVSQRFDISDYVSRLHKRGIEPHVDETLSDGVTESQESHANTAVSMRHAKVSATPDGE
ENHVISSDDDDDILAARPIRVKRKSGDTSASQDTPELSEAQIKARVEKQLSEFGIGPDHA
RARQSRDYVEQELGHVSLVHHQLSKLKSELTKKLNDLDRGLGYGGFNGMKPAVGFWGNDG
TANGGAEDPVVSETDEIMAKFWDAYVSRKDREQGHRNGSRDVGTFRGQKRSSALVRNDEG
EDDRLVKKKKNGDAGDQTGEKPRGNDSIGSAINDVIDLDEADVEGNGKHDKGSLGNLSLE
ESRELENLLLAESDSELSDFPSDVDDYEEELEVHVASGVSGQENEGQDSADVSASANLSL
DDSFEEETQLKPLPKNFKIIPPYQAIEEEEDDEAEDDDDDDDKDENSHTERSEDDDDFES
PVVRTMSRRRSAGRPNYKEIPPDFDEFNEESADEEIADGGSAEQEVTTRTRRTRARVVLD
VESSGDDEAEAESAEETVGRRTGHQSRQIAVDESASEDELGFEDESVTLKQKSGRARGKK
PTRGRSGRTRAIKYIQEDNVEEEEDEEIDEYEDEDDSAEEIVEETDPEDISAEEKEYSGL
KKAERKKPHSFTDLFHNRGKNRVSLFSDSGTDSSSGSDSDEFVEIVAVPKNQPKVVPRKR
IGPVTSLASRGRSRRRPKFESSSEEISDSSDSPQLDDDSDDDVSQSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG