YALI0D14982g

Overview

Description similar to uniprot|Q06102 Saccharomyces cerevisiae YPR107c YTH1 protein of the 3 processing complex
Locus type CDS
Locus tag YALI0D14982g

Location

Species Yarrowia lipolytica Positions 1817876..1818520
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 645 (nuc.)
Previous locus YALI0D14938r Next locus YALI0D15004g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14982g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14982gYALI0D14982g_mRNA-001YALI0D14982g_CDS-001

Nucleotide sequence

 

>YALI0D14982g
ATGAAGTTTGAAACGCCCTCTCGATTCAAGTTCACGCCATATCTCGAACGAGAGTACCAA
TTCGGCCTAGACCCCAACCGGCCATTATGTCGAGGGTTCCTTCAGTTTGACGGATGTCCT
CGAGGCAACTCTTGTCCTGACAAGCATCTGGCTCCCACATTTCTCAACAAGATTGTGTGC
AAACATTGGCTACGAGGCCTGTGCAAGAAGGGCCTCAACTGCGAGTTTTTGCACGAGTAC
AATCTCCAAAAGATGCCCGAGTGCCAGTTCTATGTCAAGAACGGCTTTTGCACACAGTCA
CCAGACTGCCAGTACCTTCACATTGATCCCGCTTCCAAGATCCCCGTGTGCTTCAACTAC
GAAAAGGGCTTCTGTAAGATGGGACCCGAGTGCTCAAGAAAACACATCAGACGCATGCCC
TGCGAGCTGTACATGACGGGCTTCTGTCCAAAGGGACGGGTATGCGAGTTTGCACATCCC
AAGTTTGTCGGCATCTACGACTACATGATCATCAAGCCCAATCCCAAGGACAAGGCCAAG
GACGAGACCAAACAGGAGACCAAGGAGGAAGCATTACAATAAGATCGAAACTCAACTCAA
GTCCATAAACATATATACAAACAATAGCATATTTATCACAATAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14982g_CDS-001

Protein length: 194 aa.
Product: Essential RNA-binding component of cleavage and polyadenylation factor, putative

>YALI0D14982g_CDS-001 MKFETPSRFKFTPYLEREYQFGLDPNRPLCRGFLQFDGCPRGNSCPDKHLAPTFLNKIVC
KHWLRGLCKKGLNCEFLHEYNLQKMPECQFYVKNGFCTQSPDCQYLHIDPASKIPVCFNY
EKGFCKMGPECSRKHIRRMPCELYMTGFCPKGRVCEFAHPKFVGIYDYMIIKPNPKDKAK
DETKQETKEEALQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG