YALI0D14652g

Overview

Description similar to uniprot|P32558 Saccharomyces cerevisiae YGL207w SPT16 general chromatin factor
Locus type CDS
Locus tag YALI0D14652g

Location

Species Yarrowia lipolytica Positions 1789546..1792605
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3060 (nuc.)
Previous locus YALI0D14630g Next locus YALI0D14674g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14652g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14652gYALI0D14652g_mRNA-001YALI0D14652g_CDS-001

Nucleotide sequence

 

>YALI0D14652g
ATGGAGGTCAAAATCTCTGAATCTGCGTTCAACACACGCGTAGAAAAGCTGCAGGGGGCG
CTGAACACGCACAAAGACGCGTTTGGCGGCGCCGACTCGGTTCTGCTGCTAATTGGCAAA
GGTGGAGATGACAATCCCTACATCAAGACTGCCGTGGCCCAAAACTGGCTGCTGGGCTAC
GAGTTTTTCTCCACAGCTCTGCTGGTGACGCCCAAGCGGGTCATTTTCGTCACAAACTCG
TCCAAGGCCGTCCATCTAGAGGGTCTCAAGAAGGACGACAAGGTGGAGGTGTGGGTGCGG
CCCAAGGAGGGAGGTAAGGAGGTGATGGAGAAGCTGGCCAAGGTGGCCAAGGAGGCCGGC
AACAAGCTTGGCGTCGTGGTCAAGGACAAGTTCCGAGGCCCCATTGTCGACGAGTTTGAA
GCTGCCCTCAAGGACAGTGGGATCGAAAAGGTCGACATTGAGGTCGGGCTGTCCCACCTG
CTGGAAGCCAAGGATGACGACGAAATCAAGAGCATCCGGGTGGCGTCGCGGGCCTCCACG
GCCTACCTGACAAAGTTCTTCACCGACCAGATGCTTGGTATCGTCGACGAGGAGCGGCGG
CTGTCGCACTCAAAGTTCTCGGAGCAGATTGAAAACAAGCTGCAGGACGAGGGCTTCTTT
GCGCAGAACCAGGTCAAGCTGGGCAGCGACTTCCACCAGACCAACCTCGAGTGGTGCTAC
ATGCCAATCATTCAATCCGGAGGCAAGTACGATCTGCGGCCCTCGGCTGTGTCTGACGAC
GCAAACCTCCACGGAGGCACGATTGTGTGTACCCTGGGTACCCGATACAAGGGCTATTGC
TCTAACGTGGGTCGAACCTTTATGATCAACCCCACCAAGGCCCAAGAGCAGAACTACGAA
GTGCTGGTGGGCCTGCGGGAAAAGGTGTTTGACTCCATCAAGGTCGGCGCCAAGGCCTGC
GACGTCTACAACGCCGCCGTCTCCTACATCAAGTCCAAGGCCCCCAAGCTCGAGGCTCAC
CTGCTAAAAACCATAGGCTGGAGCATTGGCATTGACTTCCGAGACGCCAAGTTCCTGCTA
AACGCCAAGTGCCAGCGAGAGATTGTCGACGGCTCCACGTTTGACGTGTCGCTGGGCTTC
CAGAACCTGACCAACTCGGCCGCCACCGATCCCAAGAACAAGACATACTCGCTTGCTCTG
GTCGACACTGTGCGTGTCACTCGAGCAGGCGTGGCTGTTCTGACCGATTCCGCGCCCGTG
GCTCTGTCGGAAGTCACCTACTTCTTTGAGGATGACGACGAGGACGCCGAGAAGGAAAAG
AAGAAGAAGGAGCAGGCCAAAAAAGAGAAAAAACAGCAACAGGCGGCTGCTACCGTGTCG
TCCATCACCCGGACCAAGCTGCGTCATGAGGCTCGAGCCGAAGATAACAATGACCAGAAA
CGAAAGGACGACCAGAAAGCCCTGCACGAAAAGCTCAACAAGGCCGGCCTGGAACGGTTC
AAGAACACAGAAGGTGCTCTTAACGGCGAGGAGAAGGTGGTCATCAAGAAGTTTGAGTCG
TACAAGCGAGATACTCAGCTGCCCCAGAATCTGCTCAAGGATCTGCGGGTCCACGTGGAC
ACCCGGTCGCAGTCCATCATTCTGCCCATCAACGGCCGGCCCGTGCCCTTCCACATCAAC
ACGTACAAGTCTGGCTCGAAAACTGACGAGGGCGACTACGTGTACATCCGGCTCAACTTG
TCGTCTCCGGGCCAGATTGCAGGCTCCAAGAAGGACGCGCCCCAGGTGTTTGAGGACCCT
GACGCACAGTTCCTGCGGTCCATCACGTTCCGGTCGCGGCACGTGGAGCACATGAACGAT
GTTTTCAAGCAGATCCAGGACCTCAAGAAGGCATCGACCAAAAAGGAGGCCGAGAAGAAG
GAGATGGAGGACGTGGTGGCCCAGGATTCGCTGGTGGAGGTGCGAGCTCGACGGCCGCTC
AAGCTGGACGCTGTGTTTGTGCGTCCTGCACCGGACGGAAAGCGAGTTGCAGGCACTCTG
GAGATCCACCAGAACGGTCTCCGATACGTCTCGCCCATCCGGTCCGACCACAAGATTGAC
GTGCTGTTTGACAACATTAAGCATCTATTTTTCCAGCCTACCGAGGGCGAGCTCATTGTG
TGCATTCATGCGCATCTTAAAAACCCCATCCTGATCGGCAAAAAGAAGACGTGGGACGTG
CAGTTTTATCGAGAGGCCAGCGACATGGCTTTTGACGAAACTGGAAACCGGAAGCGAAAG
TACCGGTACGGAGATGAGGACGAGCTGGAGGCCGAGCAGGAGGAACGAAGACGACGGCTG
CAGCTCGACAAGGAGTTCAAGGCCTTCTCTGAGAAGATTTCCGAGGCGTCTGACCGAAAG
GTCGATGTCGATACTCCCTTCCGAGAGCTGGGATTCCACGGTGTTCCGTTCCGGTCCAAC
GTTCTGCTCCAGCCCTCTGCCGACTGTCTGGTCCAGCTCATTGATACGCCCTTTTCGGTC
ATTACTCTGGGCGAAATCGAGCTGGCGCATCTTGAGCGAGTCCAGTTTGGTCTCAAGAAC
TTCGATCTGGTGTTTGTCTATAAGGACTTCAACCGGCCCGTTACACACATCAACTCGATT
CCGGTGGACCAGCTGGATGCCGTCAAGGACTGGCTCAACGAGGTTGAGATTCCGTACTCT
GAGGGTCCCGTCAACCTTAACTGGGGATCCATTATGAAGACCGTTGTTGCCGACCCCCAG
GAGTTTTTTACTTCCGGTGGATGGTCTTTCCTGGACCTGGAGTCGGACGACGAGGATCAA
GAGGAGGAGGAGTCCGAGTTTGAGGTGTCTGACGACGAGCCCGAGGACGAGGATGAGGAC
TCGGAGGAGTTTGCCTCTGAAGACGATTCCGAGGGCGATTTTGACTCTGAGGAGGAGAGT
GGCGAGGACTGGGATGAGTTGGAGAAGCAGGCAGCTGCTGAAGATGGTGAGCCTCCCCGA
AAGAAGCGCTAAGCTGGGGGAATCTATGTATGTAATAATTGATGTATGATATGGTAGCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14652g_CDS-001

Protein length: 1004 aa.
Product: Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), putative

>YALI0D14652g_CDS-001 MEVKISESAFNTRVEKLQGALNTHKDAFGGADSVLLLIGKGGDDNPYIKTAVAQNWLLGY
EFFSTALLVTPKRVIFVTNSSKAVHLEGLKKDDKVEVWVRPKEGGKEVMEKLAKVAKEAG
NKLGVVVKDKFRGPIVDEFEAALKDSGIEKVDIEVGLSHLLEAKDDDEIKSIRVASRAST
AYLTKFFTDQMLGIVDEERRLSHSKFSEQIENKLQDEGFFAQNQVKLGSDFHQTNLEWCY
MPIIQSGGKYDLRPSAVSDDANLHGGTIVCTLGTRYKGYCSNVGRTFMINPTKAQEQNYE
VLVGLREKVFDSIKVGAKACDVYNAAVSYIKSKAPKLEAHLLKTIGWSIGIDFRDAKFLL
NAKCQREIVDGSTFDVSLGFQNLTNSAATDPKNKTYSLALVDTVRVTRAGVAVLTDSAPV
ALSEVTYFFEDDDEDAEKEKKKKEQAKKEKKQQQAAATVSSITRTKLRHEARAEDNNDQK
RKDDQKALHEKLNKAGLERFKNTEGALNGEEKVVIKKFESYKRDTQLPQNLLKDLRVHVD
TRSQSIILPINGRPVPFHINTYKSGSKTDEGDYVYIRLNLSSPGQIAGSKKDAPQVFEDP
DAQFLRSITFRSRHVEHMNDVFKQIQDLKKASTKKEAEKKEMEDVVAQDSLVEVRARRPL
KLDAVFVRPAPDGKRVAGTLEIHQNGLRYVSPIRSDHKIDVLFDNIKHLFFQPTEGELIV
CIHAHLKNPILIGKKKTWDVQFYREASDMAFDETGNRKRKYRYGDEDELEAEQEERRRRL
QLDKEFKAFSEKISEASDRKVDVDTPFRELGFHGVPFRSNVLLQPSADCLVQLIDTPFSV
ITLGEIELAHLERVQFGLKNFDLVFVYKDFNRPVTHINSIPVDQLDAVKDWLNEVEIPYS
EGPVNLNWGSIMKTVVADPQEFFTSGGWSFLDLESDDEDQEEEESEFEVSDDEPEDEDED
SEEFASEDDSEGDFDSEEESGEDWDELEKQAAAEDGEPPRKKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG