YALI0D14542g

Overview

Description similar to uniprot|P11792 Saccharomyces cerevisiae YHR205w SCH9 serine/threonine protein kinase involved in stress response and nutrient-sensing signaling pathway
Locus type CDS
Locus tag YALI0D14542g

Location

Species Yarrowia lipolytica Positions 1774713..1776977
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2265 (nuc.)
Previous locus YALI0D14531r Next locus YALI0D14564g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14542g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14542gYALI0D14542g_mRNA-001YALI0D14542g_CDS-001

Nucleotide sequence

 

>YALI0D14542g
ATGGTGGAGTTCCCTCGCTCTCTGTTTTCGTTCCACAAAAAGTCAGCCCCCACCGTCACC
GACACAAACAGCTCCCCCAACCCCCCCGCCGGCAGTTACTCCAACACAACCACAGGCCCC
AGCACCAACACAAACGCCCCGTCGCCCGCGCCCCCGATCCTGCGATCTCCATCCACCACA
CACCTTCAACAAGTCCCCAAGGCCGTGTGCACCAGCGAAACCGTCAACGTCTCCGGCGAG
ATCATCCACGGCAAACGTCAATCCCGGGACCGTCTCCAGGAACTCGATCTGAAAAAGAAG
TCGCTGTCGTCCAACACCACCACCCCAACCGTCAGCCAACCAACCTCCAGCAAGTCGTCG
CTCAACTCCACCACCATGAACTTTGGCCAGATCCAGGAAAAAACCCCGCACGTGGGGCTC
GAAGAATCCACCTCGTCCAAGGCCAAACTGGTGGCGAAAATCGTCGCCGCCCGAAACCTG
CAGGCCGCCCCCAACTGCAGACCCTACGTGGTGTGCACCTTCGGCACCTCCGAGTTCATC
ACCGAGACCGGCGACTCGGATCCTAACGACGTGGCCATGGGCAACACCACCCCTATGGCG
TCCAACGCCGGCGTCAACATCATGCCCAAGAAGCCCATCATGGCGTCGGGACACACCGTC
GGATCCATCAACCCCACATGGAAGGAAGAGACCGTGTTCGACGTGACCGCCCGTGACGCC
TCGGAGCTCGTCATCTCCGTCTACGACGGCGCCAACAACGACGCCTTTCTGGGCCACGTG
CGCATCTCGACGATCCTGGGCCCCGGCAAGGTGCTCGATGCGTGGTACCCGCTGGAAAAC
CGAGTCGAGGGCGAGCACGTCAATGGCGAGGTGCGAGTGCAGGCGTACTACGAAGACACG
GTGCGAACGAAGATGGGCCCCGAGGACTTTGAGATTCTGCGGCTCATTGGCAAGGGCACC
TTTGGCCAGGTCTATCAGGTGCGAAAGAAGGACACGCGCCGAATCTACGCCATGAAGGTG
CTGTCCAAGAAGGTGGTTGTGCAGAAGAAGGAGATTGCTCACACAATTGGCGAGCGAGAC
ATTCTCGTGCGAACTTCTACTACCCAGTCACCCTTCATTGTCGGCCTCAAGTTTTCGTTC
CAGACCGAGGCGGACCTGTACTTTGTTACCGATTACATGAGCGGAGGCGAACTGTTCTGG
CACCTGCAGCGAGAGGGCCGATTCAGCGAGCAGCGAGCCAAGTTTTACATCGCCGAGCTC
GTCATTGCGCTGGAACACCTGCACGACAACAACATTGTGTACCGAGACCTCAAGCCCGAA
AACATTCTGCTTGACGCCAACGGACACATTGCTCTGTGTGACTTTGGTCTGTCCAAGGCC
AATGTGACCCAGGGAGACACCACGTCCACATTTTGCGGCACCACCGAGTACCTTGCCCCC
GAGGTGCTGCTGGACGAGTCCGGATACACCAAGATGGTCGACTTTTGGTCGCTGGGCGTG
CTCATTTTCGAAATGTGCTGCGGCTGGTCGCCATTCCACGCCGATGACACCCAGCAGATG
TACAAGAACATTGCTTTTGGCAAGGTCAAGTTCCCCAAGGATGCTTTGTCTGCCGAGGGC
CGATCGTTCGTCAAGGGTCTGCTCAACAGAAACCCCGAAAACCGGCTGGGAGCCCAGGAT
GACGCTCGAGAGCTGCGGCGCCATCCCTTTTTCCACGATATCGACTGGGACCAGCTCATC
CAGAAGAAGATCCCTCCTCCGTTCAAGCCACACGTGGCGTCGGAGACTGACACTTCCAAC
TTTGACCCCGAGTTCACCGAGGCGTCGACCTCGTTGTTCAAGTCGATGAAGGTGGGCACC
CCACTGTCGCCACGAATCCAGGACAATTTCGTGGGCTTCACCTTTGTTGGCGAGTCGTCC
ATGGATGAGCATTTCAAGCACCGGCCCACCTCTCGACCCGTGGAGACTGTAGATGAGGAT
ATGATGGAGAGTGATAACGAGGACGAGGATATGGGCGATGAGGAGATGTTCAGCGGGCGG
TTTGAGATGTAACGAGTCTTGTCGAGCCGTTGTTCAAGACAATGGCGTTCTGTCTTTCTT
TCAAGAAAAGAGACATGCGTCTACAGTTTTGTCGCACACGCCATTCGCTGTACGAGCCGT
TGGACCGGCCGTTGGACAGGCCGTTGGTGGTGCGACGTTGCTATCCGTGCATTACATCCC
TAGAACCACTTATTTTCTTTATTTTGTTAATACTATTTCTGTCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14542g_CDS-001

Protein length: 684 aa.
Product: AGC family protein kinase, putative

>YALI0D14542g_CDS-001 MVEFPRSLFSFHKKSAPTVTDTNSSPNPPAGSYSNTTTGPSTNTNAPSPAPPILRSPSTT
HLQQVPKAVCTSETVNVSGEIIHGKRQSRDRLQELDLKKKSLSSNTTTPTVSQPTSSKSS
LNSTTMNFGQIQEKTPHVGLEESTSSKAKLVAKIVAARNLQAAPNCRPYVVCTFGTSEFI
TETGDSDPNDVAMGNTTPMASNAGVNIMPKKPIMASGHTVGSINPTWKEETVFDVTARDA
SELVISVYDGANNDAFLGHVRISTILGPGKVLDAWYPLENRVEGEHVNGEVRVQAYYEDT
VRTKMGPEDFEILRLIGKGTFGQVYQVRKKDTRRIYAMKVLSKKVVVQKKEIAHTIGERD
ILVRTSTTQSPFIVGLKFSFQTEADLYFVTDYMSGGELFWHLQREGRFSEQRAKFYIAEL
VIALEHLHDNNIVYRDLKPENILLDANGHIALCDFGLSKANVTQGDTTSTFCGTTEYLAP
EVLLDESGYTKMVDFWSLGVLIFEMCCGWSPFHADDTQQMYKNIAFGKVKFPKDALSAEG
RSFVKGLLNRNPENRLGAQDDARELRRHPFFHDIDWDQLIQKKIPPPFKPHVASETDTSN
FDPEFTEASTSLFKSMKVGTPLSPRIQDNFVGFTFVGESSMDEHFKHRPTSRPVETVDED
MMESDNEDEDMGDEEMFSGRFEM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG