YALI0D14520g

Overview

Description weakly similar to uniprot|P38889 Saccharomyces cerevisiae YHR206W (ohnolog of YJR147W) SKN7 transcription factor, response regulator receiver of two components sensing
Locus type CDS
Locus tag YALI0D14520g

Location

Species Yarrowia lipolytica Positions 1769135..1770646
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1512 (nuc.)
Previous locus YALI0D14498g Next locus YALI0D14531r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14520g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14520gYALI0D14520g_mRNA-001YALI0D14520g_CDS-001

Nucleotide sequence

 

>YALI0D14520g
ATGGAGGACGACAAAACGACCGCGACGCCGCCCACGGAGTTTGTGTGGAAGCTGTACATG
ATGCTGGAGGAAGGGAACGACAACACGGTGTTCTGGACGCCCGATGGCCGCTCGTTTGTC
ATCTCCGACACAATCGAGTTCTCCAAAACCACCTTACCCCGCCATTTCCGACACAAGAAC
TTCTCGTCGTTTGTTCGCCAGCTCAACAAGTACGACTTCCACAAGGTCAAGAGCACCAAC
GACGACGGCGAGCCGGTTTACGGCGAAAACGGCTGGGAGTTCAAACACCCCAACTTTCTG
CAATTTGATACCTCGGGAATCGACTCCATCCGCCGCAAGCTGCCGGAAAAACGCCGCGCC
GAGGGCCCCTCGGGGTACCGCGAACTGGAGGACGAGCTGCACGACCTGAAACGTAAGCAC
GAGAGCCTGCAGAAGCACTTCACGTCGCTGTCCGAAGACTTCTCCAATGCCATAGGCAAG
CTCTCGGGCCTGCAGGAAAGCCTTAAGAAGAAGGAGGAGACCATGAACCACGTGTTTTCC
ATGCTGGCGGAGTTTGAGTACCGATTCGAGCGCCTCGGCATGTCCCAGGACGACACGGCG
TCGTTCGACCATATCAAGCGGCGCAGAACAGACCCTTCGGCGGCCGCACAAGCACAAGCA
CAAGCGCAAGCACAAGCACAAGCACAAGCACAAGCACAAGCACAAGCACAAGCCACAACC
AACTACGACGACCATATGTGGCCCTCGACCACCCACACATGGCTGCCATTGCACCCTCCC
CAGGTACGGCGGGACTCCAATGGCAAGGCCCATCCCGATGGCCACGCCGACAACACGGCC
GAGTCGACCGAAATCCACCAGAATGGCGAGGTGCAGAAAATTCTCATAGCGTCGGACGAC
TCAGACTGCGTCAAAATCTGCTCGACGCTGCTGCAAAAGGCCGGCCAGGTCGTGGAGGTA
ATTCCGGATGGAGTAGACGCGGTGGAGTTTCTGCAAACATCGGCTAGTCACGTAGGACTG
GTGTTGATGGAGACGGTTCTTCCACGGCTAGACGGTTGCTCAGCAGTGGAGCTGATCCGG
TCCATGAACCGCCAGGTGCCAATCATCATGATCAATGACGGCTCCGTAAACCCCAAACTG
GAGTTTCTGCTGCAGAGCGGGTATGTCAACGAGGTGTTGGCGCGGCCATTCAACAAGGAC
GACTTTTTCAAGGCGGTCAGCCCTCACGTGAGCTTGGCGTCGTACTAGAACTCCGTCGAT
CCATCCAGTTCGATAGCGGTCGACCTACAGAAATAATCACAGGTGCAATTCTAGTCGAGA
GCCTTGGCCCTTGCAAAAGTAAACTGTCCTATCAGCACCGCCTGCTGTTCCAGAGTCACT
ATATCACGATACAGTACAGTCCGATACGAGTGCTTACTGCACTTTGCCATTAGGTCGGCA
TGCGAACCAGGAGCCGAGCAGAACAGCAGGATAGAAGGATAATGAAGTAAATGAATCTGT
TATTTATAACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14520g_CDS-001

Protein length: 416 aa.
Product: Conserved hypothetical protein

>YALI0D14520g_CDS-001 MEDDKTTATPPTEFVWKLYMMLEEGNDNTVFWTPDGRSFVISDTIEFSKTTLPRHFRHKN
FSSFVRQLNKYDFHKVKSTNDDGEPVYGENGWEFKHPNFLQFDTSGIDSIRRKLPEKRRA
EGPSGYRELEDELHDLKRKHESLQKHFTSLSEDFSNAIGKLSGLQESLKKKEETMNHVFS
MLAEFEYRFERLGMSQDDTASFDHIKRRRTDPSAAAQAQAQAQAQAQAQAQAQAQAQATT
NYDDHMWPSTTHTWLPLHPPQVRRDSNGKAHPDGHADNTAESTEIHQNGEVQKILIASDD
SDCVKICSTLLQKAGQVVEVIPDGVDAVEFLQTSASHVGLVLMETVLPRLDGCSAVELIR
SMNRQVPIIMINDGSVNPKLEFLLQSGYVNEVLARPFNKDDFFKAVSPHVSLASY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG