YALI0D14322g - PDX3

Overview

Description uniprot|Q6C946 Yarrowia lipolytica YALI0D14322g PDX3 Pyridoxamine-phosphate oxidase
Locus type CDS
Gene name PDX3
Locus tag YALI0D14322g

Location

Species Yarrowia lipolytica Positions 1745588..1747785
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2198 (nuc.)
Previous locus YALI0D14256r Next locus YALI0D14300g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D14322g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D14322gYALI0D14322g_mRNA-001YALI0D14322g_CDS-001

Nucleotide sequence

 

>YALI0D14322g
ATGTCACGCATTCTGCCGTCGCTCCGTCGCTTCTCCACCTCCAGAATGAACCTCGACAAA
ATCATCACAGCAAACCCCACGCACCAGTACAAACAGGCGACTCTGGACGTGCAGGACGTG
AGTCCAGACCCCATTGTGCAGTTCCAGAAATGGTTCCAGCAGGCCAAGGACGCCGGCATC
CCCATTCCCGAGGCAGTCAACTTCGCCACCGCGCAGCTGCCGTCCGGTCGGGTCAGCTCG
CGAACTGTGCTCTTCAAGGAGCTCGATCCACGTGGCCTCATCATCTACTCCAACTGGGGC
ACCAGCAAAAAGTCGCGCGACGTCAAGTCCAACCCTTGGGCCGCCATCACATTTTTCTGG
AAGGAGTCTGAGCGCCAGGTCCGCATTGAGGGCCACGTCGAGCTCCTGTCGCCGCAAGAG
TCGCAGGAATACTACTCGTCGCGACCGCGAGACTCGCAGATTGGCGCCTGGGCGTCCCCT
CAGTCCCAGGTGATTGCCGACCGATCTGTGCTCGACAAGAAGATTGACGAAATCACCAAC
AAGTTCAAGGACACGGATAAAATCCCCGTGCCGGACTTTTGGGGAGGCGCTCGCCTGGTG
CCTCTGGAATGGGAGTTCTGGCAGGGCCGAGAGAGCCGAGTGCATGACCGGGTCGTTTAC
GTGAGAGATAGCGAAAAGGACCAGTGGCGAATCGAGAGAATTGCTCCTTAGCTTGTCCTG
AAACAGGTCTCGTGATGTATATAAAAAGTGGCTAATGTAATATATTGGCTACAGATTGGC
CCAGTGTTGGGAGACGGCTATTTGAGAGGGCCGGTGATGGGGCGAATGTCGGTCTTGTCG
GTGTAAACGGCCTGGGCCAGGCCGATCTGCGAGTCTTCGAGATCGTAGGCCACGTAGGCG
TTTCGCAGAAAGGTGTCTCCGAACAGCGTGATGTTCTGAGAAAGCGTGTTGGACTGAAGT
CCAAAGAAACAATCGCCCAGGCCGGAAGGGATGAGCATCTGTTCCTTGAGGGCCTTGATG
GTGACTCCGTCAAAGTTGAACTCCAGCTCAAAGTCCTTGTTGCAGTCCACCGTCGTCATG
CCGAAGAAGGTGTTGTCTCCAATGTTGAGCTTCTTGGCAATCTTCTGGTAGGCCGCATCG
GGGATGTAGGTGAAGGAGGTTCCCGAGTCGAGCACCGCGGCTCCAGCTTCGGCTACTTGT
TCGCCGTCGAAAGCGATGCTCTTGTAGTCGACAAAGAAGGCGTTGGGGGTAGCCAGAGGC
AGCACGGTCAGACTTCCGTTGAACTTGGCGTAGTCGACTCCACCCAGCAAAAAGGTGCCG
TTGGTAGCGTCATTCTGGTCCAGATACAGAGAGTACACCCGTCGGTCAATGTAGCCTGCA
TTCTGCAGAGCCAGGGGGAAGTTGGCGTAGGGCTTCTGTCCTTTGTGGAGCGATTCTGAG
CCCGCGACAGACACTCCAAGAATGCCAGTTTGGCCCTCGGCATTGTCAGCGCATGCAAAC
TGGAAGTTGGGGAGCGTCACGCTGCCGGCAGAAAGAGTGTCTGTTCCCCAGTAGCCCGTG
GCGTTGCCCAAAACATACTGGATGAAGTAATCCTCGTCCAGAGAGTGGTAGGTGGAGGAC
TTGGATTTGTCAAACTGGCCAGTCTGTTGACACGCTTGGTAGGCGCAGTCGGCGGTATCG
GTCACGTTGTAGACCCACAGGTCGGACGAACCCGTGTCCAGCAACAGCTGAAAGTTCTGA
ATGGGGGTGCCCAGACCCACGTTGATGGAGTAGTAGGTGAACTGGTTGGTGATCACCAGC
GGGTCCGGTCGCGAGTTGTGCAGCAGATGGTGCTGTGCAAACTTGGAGTTTTCGTGGTGC
TTGGTGACGGGGAATGTCAGCACTTTGGGGTTGCCGGGAGCGGCAGAAACGAGCGCCAGA
AAAGAAGCTACAAGAGTGGTGGAGAAGAACATGTGAGAATGGTGTATCGTCTCACTACCG
AACTCACTGCTCGATTATATACCTAGACCCCCATACTCCCTATACCGTGATTCAATTGGC
ACGGCATCATGATATCGCAAGAGACACGATAACGCTCTGTAACATTGAACTGGTTACGGC
CCATTAAGTTCAACTTTGAGCGCCGTTGCCAAGTTTCAGCCCAGCCCGCCAAGACGGTAG
GCGAAACCTAATGTGACCACAATACAAAGTTCAATATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D14322g_CDS-001

Protein length: 237 aa.
Product: Pyridoxamine-phosphate oxidase
Gene: PDX3

>YALI0D14322g_CDS-001 MSRILPSLRRFSTSRMNLDKIITANPTHQYKQATLDVQDVSPDPIVQFQKWFQQAKDAGI
PIPEAVNFATAQLPSGRVSSRTVLFKELDPRGLIIYSNWGTSKKSRDVKSNPWAAITFFW
KESERQVRIEGHVELLSPQESQEYYSSRPRDSQIGAWASPQSQVIADRSVLDKKIDEITN
KFKDTDKIPVPDFWGGARLVPLEWEFWQGRESRVHDRVVYVRDSEKDQWRIERIAP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG