YALI0D13992g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D13992g

Location

Species Yarrowia lipolytica Positions 1730483..1733203
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2721 (nuc.)
Previous locus YALI0D13970g Next locus YALI0D14014r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13992g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13992gYALI0D13992g_mRNA-001YALI0D13992g_CDS-001

Nucleotide sequence

 

>YALI0D13992g
ATGACAGACAAGATCCCCAGCCCCCTGCGGCAGGACATGCCCCACAGCTCCATGAGGTCG
CGGTTTTTCCGCAAGCTGTTTGCCTCGTCGGCCTCCAAGCTGGCCAAAAACACCTCTGCA
AATGGCTCCAGCCACGGGTTCCATATTCGCCGAGTGCGACGATCCACGTCTGAAGACTCC
ATCATGCCGAGACTGGGCCACCTTGGCGACAAGTCGCTGACCGGCGTGAGTCGGCACGTG
AGCCGAGAAATGGAGGCCGCCGACAAAAAGCGCATCTCGCTGATTGGCAACGAATCTGTG
TCGCACCTGCAGTCTCTCGCCAAAGAGTCGCCCGCTTGTACCAACACCAACACTACCGCT
ACCAACACTACCGACTCTGACACTAACCATGGCGCTGCCAATGTCGCCGTGAACCACGCC
AACCGCAACTACGCCCCTCAACCCAGACACATCTACGACTTGTCTACTGTGGCCGATTCC
TCCGATGCCAACTTCTCAAGTGCCAGCAGGTTCTCCAACGACTTTGTCGACCACTCGCAG
AAATCCCAGATCATGACGGAGGAGGATGCCCGGCTGTTCTTTGAGTCACGACGAGAACAG
CGCTTCTCACTCATAGACACACGTGACCTCGAGGATCAGTCGTGGGCTGTAAACGCAGAC
GACAACGACGACGAGTTCAAAATACTGCTTGTCAAGAACCACACGCTCGAAACTCGATTA
GACTCTCTTGAACAGGACCTTGGTCAACCCAATCCCTCCAACCAGCTCAACAGAAAGATG
ACTCTCTCTCCTTCCTGTCCTCTGTTGAATGTCGATGGAAAGATTGACCAGCCCTGGGCC
ACCAAAGAGCAGCTCGAGCAGATGGCCAAAGCGTTTCCGGATACCAATCGACCTGGTGGG
GTACCTAAGGTCGACCTTGTCACCCACCCTCGAGGCGACGATCATGACAGGGGGTACAGT
CTTGGAAATGCCGCCGCAGCCACCGAAGAGACATGTCACGATCCTTATTCCAACATTCAG
GCATTAAATTATGGGACTACAGCTCCCTTATCATACGCGGCTGCTGTCAACAACCTTGTC
GAAGCTACTGCCCCCCACACTTATGTCAACCCTGTTGCGGCCTCCTCTGAAACTGCTGCC
CTATTGTTTCAGTGGGATCAGCAGTGGGTTGGTTCTTACGCGTCCGGAAGCCCCGAGTTT
TGCATGGGCCTAGCACCTCCGGATACCATCTTTGGCTCAACCCGTCCTCCTCCTTCCGAT
ATCTATGGTACATCACGTCCTGTCGCTGCTATTACTCCATCTGCGGATAGCACTGGTTCT
GCTGTTGGTGCAATTACTACAGAGACTCCTGTTGCTGATGCACCCACTGCATCTACTACA
GCACCAGCTCCTGCCACCATTGCATCTACCGCTACTCCTGCTATCACTCTTCTTGCGGCC
ACTTCTCCTGTTGTCGCAGCTGCGACGAACGCAGCCCCTTCTACCACCAATGCCGACACA
ACAGAAGGTAGATCTCAACGATGGATCTCTGGTCATCATGGAGACCTTGTGCCACAGGCG
TGCTCGTCCACTTTGTCTACAAACCCCGCTGGCAATCTGAGCACTGGGCGAGTCTCTGGG
CCCATCCCAGTCACTCCAACCAACAAGAAGATGCCTGCAGTCCCCAGAGTTCCCCGAAAG
CCCGTCTCAAGTGTTAAGACCGGCTCTCCTGGGACTCCCTCGGCAGCAGCTGGCTCCTCG
GGCTCCTCGGGCTCCTCGGGCTCCTCAGGCTCTCCTGGTGCCCCAGTACCGTCCAGAAGT
CAGTCCCGGGTAGTCAGTGGCTCGTCAGATCAGACCTGTGTGGACCTCTCTGAACAGGTG
GTCGATTCGGCCGACTCAAAGAGGAACAAAGACAAGGAGGTCATTACCGGTGACAAGGAC
AGATTTTCTAACGACAAAGAGCGGCTCATGAAATTGAAGATGAAGTCATTTTCTGGTAGC
ATGTTTGAGTGCGACGCCCGGGACTTTGTGCGACAGTTTGAGTGGATGGTTGACCGGTAT
GTTGGTAAGAATTTGGCGGACATTGATTTCAACTTGCTTTACACCTACTTCAGACTGCTT
CTGGTTGACTGTCCGCTTCCTCGGTCTTCAAAGCTGGGCTCCTGGACAGCCCTTCGTGAG
TGGTTCATTGGGGAGTACTCTGTGTTTGCTACTGAATACATGCACAGAATGTACTACATG
GGTCAAATCAGTAAGCAGCATATCAAGAACGGAGACATTTTTGGTTACCTGAACCAAATT
CTGAAGCTCACCGCTAGAACGGTGGATTTCACGGCTGAAGACAAGCGACACATCTGTGAT
ACCCTCCGACACCATGTCCCCAAGGAGTTCCACCATCTTATTATCCACAGGGAAGACATT
ACCTCCACTGTGGAGTGTCTGAATACTGGTTTGAAGAGGGCTAATGTGGTGCGAGTTATC
TCTCGTATTTCCGCTTTCCTCAGACCTTTGGAATCGGACCTGTTCACGTTTGAGAACCCA
TCTCTCGAGTATGGGTATGACAGCGACAACTCGGAGGCCCCTTCCATCCGGCGGAAGGAG
TCACGGGCTACATTGTACGGCTCACGGGCGGTGGCGAATTCGCAGCACCATCGTCTCAAG
GTGAATGGCGACTTGACCATCCGCATTTCCATGGCCAACAAGACGCAGGGCTCGAGACCA
ACACTTGAGTCTGGACTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13992g_CDS-001

Protein length: 907 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D13992g_CDS-001 MTDKIPSPLRQDMPHSSMRSRFFRKLFASSASKLAKNTSANGSSHGFHIRRVRRSTSEDS
IMPRLGHLGDKSLTGVSRHVSREMEAADKKRISLIGNESVSHLQSLAKESPACTNTNTTA
TNTTDSDTNHGAANVAVNHANRNYAPQPRHIYDLSTVADSSDANFSSASRFSNDFVDHSQ
KSQIMTEEDARLFFESRREQRFSLIDTRDLEDQSWAVNADDNDDEFKILLVKNHTLETRL
DSLEQDLGQPNPSNQLNRKMTLSPSCPLLNVDGKIDQPWATKEQLEQMAKAFPDTNRPGG
VPKVDLVTHPRGDDHDRGYSLGNAAAATEETCHDPYSNIQALNYGTTAPLSYAAAVNNLV
EATAPHTYVNPVAASSETAALLFQWDQQWVGSYASGSPEFCMGLAPPDTIFGSTRPPPSD
IYGTSRPVAAITPSADSTGSAVGAITTETPVADAPTASTTAPAPATIASTATPAITLLAA
TSPVVAAATNAAPSTTNADTTEGRSQRWISGHHGDLVPQACSSTLSTNPAGNLSTGRVSG
PIPVTPTNKKMPAVPRVPRKPVSSVKTGSPGTPSAAAGSSGSSGSSGSSGSPGAPVPSRS
QSRVVSGSSDQTCVDLSEQVVDSADSKRNKDKEVITGDKDRFSNDKERLMKLKMKSFSGS
MFECDARDFVRQFEWMVDRYVGKNLADIDFNLLYTYFRLLLVDCPLPRSSKLGSWTALRE
WFIGEYSVFATEYMHRMYYMGQISKQHIKNGDIFGYLNQILKLTARTVDFTAEDKRHICD
TLRHHVPKEFHHLIIHREDITSTVECLNTGLKRANVVRVISRISAFLRPLESDLFTFENP
SLEYGYDSDNSEAPSIRRKESRATLYGSRAVANSQHHRLKVNGDLTIRISMANKTQGSRP
TLESGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG