YALI0D13948g

Overview

Description similar to uniprot|Q10272 Schizosaccharomyces pombe WD-repeat protein crb3
Locus type CDS
Locus tag YALI0D13948g

Location

Species Yarrowia lipolytica Positions 1726399..1727838
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1440 (nuc.)
Previous locus YALI0D13926r Next locus YALI0D13970g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13948g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13948gYALI0D13948g_mRNA-001YALI0D13948g_CDS-001

Nucleotide sequence

 

>YALI0D13948g
ATGGAAGAACTCATCATCTACACAACCAACAAGGGTGCATGTGCGGTGGATCTGCATTCC
GGCAACAACATTACGCACTTCAAAAACGATGAGACGGCCCCCAATCTGTCCGTCTTTCTC
ACAAACACCCCCTCGGGCAACCCTCTGCTGTTTTCTGCCCAGACCAAGGGAGCGATGATG
CACGTCTACAACTGGAACCGAGAGTCTGTGGACCAGCAGATTGTTCTTCCGGAAAAGCTG
AGCTGTCTGGCTGCCAGCACATGTGGTACTTGGCTAGCGGGAGGATCAGCTTCCGGCCGG
CTGTTTGTGTGGGAATTGGCGTCTGGAAAGCTCGTCTTTTCGCGCGAGGTGCATTACCAG
GCCGTAACCAAGTTGGCCTTCACCGACGGCCTGCTGTTTTCCACCTCCAAGGATGCCCGA
GTGCTGGGATGGTCGCTGGTGACCATGGCTTCTGACCCCAAGGACTGCCAGCCCTGTATC
ACCTGGACCGAACACAACCTCGGAGTCGTGGACCTGGTGGTCGGCGGCGGCCCCACACGT
GACACCCGTGTGTTCACAGTCTCCACTGACAAGACGGTGCGAATCTGGGACGTTTCTTCC
ACAGCCCTGCTCACAACCATTACTCTGCCTGCTGCCGAAACCCCCACTACTCTGGCAGTT
GATCAGCTCGAACGAACACTGTTTGTGGGTTGCGCCTCCGGGAATATCCTGTCTGTGTCT
CTCTACGACGTGTCGCCCAGTACAGGTCTGGTTTCTGTGGGGGGAGCTTCTGGAGTGGTG
GAGTCCGGCAACGTTGCTCTTTCCCACCATAAGAGCGCGGTCACCTCGCTGGCTCTGTCT
TTCGACGCCACCCTGCTCGTCTCAGCCGACGACAAGGGCTTCATCTGTGTCTGGGATCTG
CCCTCTCGACAGGTCTCACGATCGATCAAGCAGCCCCGAGCCGAAATGAACCCTGTCACC
TACGTCCAGACCATCACCACACACGGTCTTCCCACCGAAAAGTACAATCCCAAGACTGCC
GTCAAGCTGCCCATGCTGAAACGAGTTCAAGACGACAAACCCGAGGACCATGACATTCTG
GTGAAGATCCAGCCCAGACAGAAGACCGTGGCCCACGAAGACACTCTGCAACAGATGGTG
GAGAGCGCGCAGTTTGGAGGCGATTCTCTGGCCGGCAAGGTGGTTCAGCTTGAAAATGAG
CTGAGTCAGGCCAAGAGCAGTTTTGCCTCGTTGAAGGAGAGTCATGATACTCTGTGGAAT
ATTTACCAGCGACAGCAGTAGATCAGATGAGGCGCATGGTAGGTGAGAATCACCTGGAAA
AGAGATGGATGGTGGGAGTTGATATACTGGAATGGGCCTCGCAAAAGAGATGGAGAAGAT
GATCTTTCTGACGTCATTTAGAACAAAATAGCATGTAATAGATTGTGCATTGGGATTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13948g_CDS-001

Protein length: 427 aa.
Product: WD-repeat protein, putative

>YALI0D13948g_CDS-001 MEELIIYTTNKGACAVDLHSGNNITHFKNDETAPNLSVFLTNTPSGNPLLFSAQTKGAMM
HVYNWNRESVDQQIVLPEKLSCLAASTCGTWLAGGSASGRLFVWELASGKLVFSREVHYQ
AVTKLAFTDGLLFSTSKDARVLGWSLVTMASDPKDCQPCITWTEHNLGVVDLVVGGGPTR
DTRVFTVSTDKTVRIWDVSSTALLTTITLPAAETPTTLAVDQLERTLFVGCASGNILSVS
LYDVSPSTGLVSVGGASGVVESGNVALSHHKSAVTSLALSFDATLLVSADDKGFICVWDL
PSRQVSRSIKQPRAEMNPVTYVQTITTHGLPTEKYNPKTAVKLPMLKRVQDDKPEDHDIL
VKIQPRQKTVAHEDTLQQMVESAQFGGDSLAGKVVQLENELSQAKSSFASLKESHDTLWN
IYQRQQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG