YALI0D13706g

Overview

Description similar to uniprot|P39743 Saccharomyces cerevisiae YDR388w RVS167 Reduced viability upon starvation
Locus type CDS
Locus tag YALI0D13706g

Location

Species Yarrowia lipolytica Positions 1696374..1697760
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1387 (nuc.)
Previous locus YALI0D13695r Next locus YALI0D13717r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13706g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13706gYALI0D13706g_mRNA-001YALI0D13706g_CDS-001

Nucleotide sequence

 

>YALI0D13706g
ATGTCTATGAAAGGAATCACCAAGGGCATCGCCCGAGCGCCTCAGTCGTTCAAGGCCAAG
TTCAATATTGGGGAGCAGACCAAGGATCTGGTCTACATTGACGCCGAGAGGCGGTTCAAG
GAGCTCGAGAAGGAGACCAAGAAGCTGCACGAGGAGTCGAAAAAGTACTTTGACGCGATC
AACGGCATGCTGGAGCACCAGATCCAGTTCTCCAAGGCGATTGAGGAGATCTACAAGCCC
ATTTCTGGACGGCTGTCGGACCCCAACGGAGCCATTCCCGAGGGCAACCCCGAAGGTATC
AGTGCATGCGAGCAGTACCGTGAGGTGGTCAACGATCTGCAGGCAACGCTCAAGCCCGAG
CTGGAGATGATCGATTCGCGAATCATTGGCCCCGCCAACGAGCTGCTGGAGGTGATCAAC
TCGATTCGAAAGATGGCCACAAAGCGTGCCCACAAACAGCTGGATCTCGACCGACACAAC
AACTCGCTGAAAAAGTACCAGGATAAGAAGGAACGAAGCGTCAACGACGAGAAGAAGATG
TACTCGGCCGAGTCAGCCGTCGAAATCGCCCAGCAGGAGTACGACTACTACAACGACATG
CTCAAGGAGGAGCTGCCGCAGCTGTTTGAGCTGGAGGCCCAGTTCATCGCTCCTCTCTTC
CAGTCCTTCTACTACATGCAGCTCAACGTCTTCTACACCCTCTACATCCGCATGGAGGAA
ATGAAGATTCCCTACTTTGACCTCACCAACGAGGACATCGAGGGCGCCTTTGCTGCCAAG
CGGGGCGACGTTGCCGAGCGAACTGAACAGCTCTCCATCACCCAGTTCCGAGTCGGACAC
GCCCGTGCCAAGCTCGAAATGACAAAGCGACGGTTTGCAAAGGACAAGGATAAGGAGGCC
GCTGCAGGAGCTGCCCCCGTCGCCGGTGCTGCGCCGCCCGCTTATGGAGGCGAGGAGGCC
GCCGACCCTGCTGCAGCTGCCGCTGCCGCTCCCGCCGCGTACACCGCCACCGGCTACCCC
AACGAAAAGGCCGTGTACACGCCTCCCGGGGCTCCTGCAGCCGCCGCTCCCGCAGCTGAA
ACCTGCACCGCCCTGTACGACTACGAGGCGCAGGCTGCTGGCGACCTGTCGTTTTCCGCC
GGACAGGTCATCACCATTGTTCAGCGAACCGCTGACACCAACGGTTGGTGGACGGGTATT
GTCGGGGGACACCAGGGAGTGTTTCCTGGAAATTATGTTCAGTTGAATGCGTAACCGCAG
CGAGCGAAGCGAAGCCAGGTTGTTTGTGATCTGGCCTTGGTGGTGAGCCTGAATTATGAT
TTCACCGCCATCACGGAACTGCACTTGAACGGGCATTTAATAGTAATGAGATATGTATGC
ATTGGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13706g_CDS-001

Protein length: 418 aa.
Product: Actin-associated protein with roles in endocytosis and exocytosis, putative

>YALI0D13706g_CDS-001 MSMKGITKGIARAPQSFKAKFNIGEQTKDLVYIDAERRFKELEKETKKLHEESKKYFDAI
NGMLEHQIQFSKAIEEIYKPISGRLSDPNGAIPEGNPEGISACEQYREVVNDLQATLKPE
LEMIDSRIIGPANELLEVINSIRKMATKRAHKQLDLDRHNNSLKKYQDKKERSVNDEKKM
YSAESAVEIAQQEYDYYNDMLKEELPQLFELEAQFIAPLFQSFYYMQLNVFYTLYIRMEE
MKIPYFDLTNEDIEGAFAAKRGDVAERTEQLSITQFRVGHARAKLEMTKRRFAKDKDKEA
AAGAAPVAGAAPPAYGGEEAADPAAAAAAAPAAYTATGYPNEKAVYTPPGAPAAAAPAAE
TCTALYDYEAQAAGDLSFSAGQVITIVQRTADTNGWWTGIVGGHQGVFPGNYVQLNA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG