YALI0D13222g

Overview

Description weakly similar to uniprot|C5MDP6 Candida tropicalis conserved hypothetical protein
Locus type CDS
Locus tag YALI0D13222g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1646773..1651782
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 5010 (nuc.)
Previous locus YALI0D13200g Next locus YALI0D13255g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13222g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13222gYALI0D13222g_mRNA-001YALI0D13222g_CDS-001

Nucleotide sequence

 

>YALI0D13222g
ATGTTGAATGCACGCTACAATCTCCATGGGGTTATGCAAACTCAAGGGTGCAATACCCAT
GGGTGTTTATTGTTATCACTGAACTCGAATGTGGCATTGACACCCCTGCCAGGTTCCAGA
GATGCTCTAGACCGCCAAGTCGCCAGTGCCACGACTTTCTCATATATACCCATGGGGGAT
ATGGGCCTACGTCACAGCCACCACCACCTACTTCTACACTCATTTTCAATGGTCAAACTG
GGCTTTCTCCTGGGCTCAGCCGCTGTGGCCTCTGCAGCCATCTCCCAACACAACTTCATT
GTCGATGACATTGCCAAAAAGATCTCCACCGCCATCGTCGAAAACCGAAAGTCCGGATAC
CCCGAAAGCGACGCCGCCTCTGAGGTCTCGGTGCTTGTTAGCGCTCTCATGTCCAACCAG
GGCCTGTACAACGTCTTTGTGTCCGCCGTCAACATTGTGGCCATCGAGGGTGTCAACACT
AAAAACTTCCCTCCCTTTGCCAACGTGGTTACAAACGCTATGATCAGCTACATGTCCGAG
CCTGACTTTAGCGTAGCCTCTTCTATCGTTCTTGCTAAGGGTACCAACTACAACATTATG
CCTGCCTGGACCAAGGCTCTGCAGCTCAACTCGGATTACGTTGCTATGCTGACTTCTCCC
CTGTTCCAGATTAGTGATGTTTCTACCGTGAGCCAAGCCATCTTCACGCTACGAAGTATC
GCCACCTCTCTTCTCGTCGAGCTTCACCTGCTGTCTGCCCCCACTACCGAGGTCACCATT
CCGTCTTCTATCATTGCCCCTGTTGTTGAATCGTCTGCTCCTGTGGTTGAATCTTCCTCT
TTTTTCACCTCCACTGTAACATCCACTGTGACTACCTCGATCCCGTCTCCCTCTCCCTCA
CCTTCGTCTGTGGCTTCTCCTAAGGTTCCTTCCACATCGTCGCCTCTCGCTGTTGTCACT
TCCGTCGAGATTAACCGCCTCGCCTCAGACGTCATTCTCACCTCCACGAGCATCGAGTCC
ATTGTCCACTCCACCGAGTCAGTCTCTTCAACCGTAGTGCCCACGACTCTCACAGTTCCC
ACGGACTGTCCCAAGACTCCTCCTGCCCAAGGTCTTCTGGACTGCATCCACCAGTGCACG
ATTGTCACTCTTCAGATTGGTGCTTGCTTTGGTGTCTCTTCATGTATCTGTCCCCGATTC
AACGGTATCCGAGACGCTCTGGCCACATGTCTCTTGTGTGGAATCTACCACGACGAGGTC
AGCCAAATTATCAACAACGGCATCATCTCGTGGCTACTGGGATGCAACGAGCCAACCAAC
CCCTGCTCTGCTACCGTCACCTCCTCTAACATGGTCTACTCTACCGCTACTCTCGTCTCC
ACAGTCGTGTCTACTCACGTGGCTTATTCCACCATTAAGGTGACTACCATCACTGAGCAC
GGTCCTACAGCTGGTACTACAGCCATCACCGGCGACGATGGAATCCCCACGCAAATCATT
ACTGTTGCTCCCACCGGCCCCGTCGCCACTAGCACTGTCACTGGTCCTCATGTTGGAACT
CAGACTATCGTTGGCCCTGATGGCTACTCTACTGAGAGAGTGACGGTTGAGCCCTCCATC
CACCTAGACGGAAGTGTGACTCCTTTGACTTCAGAGACTCCAGCTCCGCTCATCACGACT
CCCGTAACTACAAAAACCGTCACAGGCGATACTGCTGGCACAGAAGTTGTGACTGGCGCA
GACGGAAAACCCACTGAACAGGTCACTGTTGTTTCTTCTAAGGCTGTTACATCCTCTTCG
GCTGCCTCTTCTGACGGAACAATTACCCAATTGGCTACAGACTCTCTGACTCCCCTGCCG
GCCACAACCAATACCGTCACTGGCCCTACTGCTGGAACTACTACAATCACAGGGACAGAT
GGCAAGCTCACCGAGCAAATTACTGTTGCTCCCACTGGTCCCGTTACCACTCGCACAGTT
ACTGGTCCCACTGCTGGCACTGGAACTGTGACTGGAGACGATGGGCTGCCTACTGAGCAA
ATCACTGTTGCTCCTACTGGTCCTGTCACTACCAAAACCGTCACCGGACCTACTGCTGGC
ACTACCACGATCACAGGGACAGACGGCAAGCTCACCGAACAGATCACTGTTGCTCCTACT
GGTCCCGTTACCACCAAAACCGTCACCGGACCTACTGCTGGCACTACCACGATCACAGGA
ACTGACGGCAAGCTCACAGAACAGATCACTGTGGCTCCTACTGGTCCTGTCACTACCAAA
ACCGTTACTGGACCTACTGCTGGCACCACCACGATCACAGGGACAGACGGCAAGCCCACA
GAGCAGATCACTGTGGCTCCTACTGGTCCCGTTACCACTCGTACAGTTACTGGTCCCACT
GCGGCACTGGAACTGTGACTGGAGACGATGGGCTGCCTACTGAGCAAATCACTGTTGCTC
CCATTGGTCCTGTCACTACCAAAACCGTCACCGGACCTACTGCTGGCACTACCACGATCA
CAGGGACAGACGGCAAGCTCACCGAACAGATCACTGTTGCTCCTACTGGTCCCGTTACCA
CCAAAACCGTCACCGGACCTACTGCTGGCACCACCACGATCACAGGGACAGACGGCAAGC
TCACCGAACAGATCACTGTTGCTCCTACTGGTCCCGTTACCACCAAAACCGTCACCGGAC
CTACTGCTGGTACTACCACGATCACAGGAACTGACGGCAAGCCCACAGAGCAAATCACTG
TGGCTCCTACTGGTCCCATTACCACCAGAACCGTTACTGGACCTACTGCTGGTACTACCA
CGATCACAGGAACTGACGGCAAGCTCACAGAACAGATCACTGTGGCTCCTACTGGTCCTG
TCACTACCAAAACCGTTACTGGACCTACTGCTGGCACCACCACGATCACAGGGACAGACG
GCAAGCCCACAGAGCAGATCACTGTGGCTCCCATTGGCCCTGTCACTACCAAAACCGTCA
CCGGACCTACTGCTGGTACTACCACGATCACAGGAACTGACGGCAAGCTCACAGAACAGA
TCACTGTGGCTCCTACTGGTCCCATTACCACCAGAACCGTCACCGGACCTACTGCTGGTA
CTACCACGATCACAGGAACTGACGGCAAGCCCACAGAGCAGATCACCGTTGCACCTGCTG
GTCCCGTCACTACCCACACTGTAACCGGACCTACTGCAGGTACAACTACGATCACAGGAG
CTGACGGCAAGCCCACTGAGCAGATCACTGTTGCTTCATCCAAGGCCACCACTGCATCTG
ATGCAGCATCTTCCTCCGCGGCTGTTGCATCCTCTTCGGCTGCCTCTTCTGACGGAAAAA
TTACCCAGTTGGCTACAGGCTCTCTTACTCCCCTACCGGCCACCACCAATATTGTCACTG
GCCCTACAGCTGGTACTACTACAATCACAGGTGCTGACGGTAAACTCACCGAGCAGATTA
CTGTGGCTCCAACTGGTCCTGTCACCACCAAAACCGTCATTGGACCCACGGCTGGCACTG
AGACCGTGACTGGAGAAGATGGCTTGCCTACCGAGCAAATCACGGTGGCTCCCATCAGCC
CCGTCACTACACAGACTGTCACTGGGCCCACAGCTGGCACCACAACGATCACAGGAACTG
ACGGCAAGCTCACAGAACAAATCACTGTGGCTCCCACTGGCCCTGTCATCACCAAAACCG
TGACTGGACCCACTGCTGGCACTGAAACCGTCACTGGAGAAGATGGCTTGCCCACCGAGC
AGATTACTGTCGCACCTACTGGCCCCGTCACCACTAAGACTGTCACTGGGCCAACTGCTG
GCACTACCACGATCACAGGGACAGACGGCAAGCTCACCGAACAGATCACTGTTGCTCCTA
CTAGTCCTGTCACTACCAAAACCGTTACTGGACCTACTGCTGGCACTACCACGATCACAG
GAACTGACGGCAAGCCCACCGAACAGATCACCGTGGCTCCCACCGGCCCTGCCACCACCA
AAACCGTCACTGGTCCCACGGCTGGCACAGAAACCGTGATTGGAGAAGATGGGTTGCCTA
CCGAGCAGATTACTGTGGCACCTACTGGCCCGGTCACTACCAAAACAGTAACCGGACCCA
CTGCTGGTACTACCACGATCACAGGAACTGACGGCAAGCTCACAGAACAGATCACTGTTG
CTCCTACTGGCCCTGTCACTACCCAGACTGTAACCGGACCTACTTCTGGCACTGAAATTG
TGACTGGAGACGATGGGTTGCCTACTGAGCGAGTCACCATTGCTTCTGTCGCTTCTGCTG
CTCAGACCAATGATAACTCCGAGACAAGTGGCACTGACGGCGATGGCCGAAATGCTGAGG
CTTCTCGGACTACGCTTTCCGAGACCGCATCTACTGCTGAGAAGACTGGTTCCGGTCATT
CTGACGCCAACAATGGAGGCTCCACGGGTGACAATGGCTCTGATGCTTCCAACGGTGGTT
CTAGGGGTGATTCCGACTCCAAAGGTGATTCTGGATCCCAGGGAGACTCATCTAAGGACG
ATTCCAGCTCCAAGAGTGATTCCGGATCTGGCACTGGCTCCGACAAGTCTAGCAACTCGG
GTTCATCTGGTTCTGGTACATCTAGCGACGCTGGTAAGTCTGAGAACTCTTCCAATGGTT
CCAACAGCTCCGGTAGCTCTACTAGTGGATCGGGCAAGTCTGACGGTTCGTCCAACAAGT
CTAACGGATCTTCCGGCTCCTCTGGATCTGGCTCTGGCTCTGGCTCTTCTGGATCCAACT
CTGGCTCTTCTGGATCCAACTCTGGCTCTTCTGGATCCAACTCTGGCTCTTCTGGATCCA
ACACTGACTCTTCCCACTCCAGCGTCGTCGCTCAGGCCAACTCTGCTGTCTCGGTTTCTG
TTTCTGCCACACTTGTTGTTGCCGCAGGTATGGCTCTTTTGTTCTAGCTTATATTTTTTA
GTGTGTAATTGATGTTTTATACCCCTCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13222g_CDS-001

Protein length: 1655 aa.
Product: Conserved hypothetical protein

>YALI0D13222g_CDS-001 MLNARYNLHGVMQTQGCNTHGCLLLSLNSNVALTPLPGSRDALDRQVASATTFSYIPMGD
MGLRHSHHHLLLHSFSMVKLGFLLGSAAVASAAISQHNFIVDDIAKKISTAIVENRKSGY
PESDAASEVSVLVSALMSNQGLYNVFVSAVNIVAIEGVNTKNFPPFANVVTNAMISYMSE
PDFSVASSIVLAKGTNYNIMPAWTKALQLNSDYVAMLTSPLFQISDVSTVSQAIFTLRSI
ATSLLVELHLLSAPTTEVTIPSSIIAPVVESSAPVVESSSFFTSTVTSTVTTSIPSPSPS
PSSVASPKVPSTSSPLAVVTSVEINRLASDVILTSTSIESIVHSTESVSSTVVPTTLTVP
TDCPKTPPAQGLLDCIHQCTIVTLQIGACFGVSSCICPRFNGIRDALATCLLCGIYHDEV
SQIINNGIISWLLGCNEPTNPCSATVTSSNMVYSTATLVSTVVSTHVAYSTIKVTTITEH
GPTAGTTAITGDDGIPTQIITVAPTGPVATSTVTGPHVGTQTIVGPDGYSTERVTVEPSI
HLDGSVTPLTSETPAPLITTPVTTKTVTGDTAGTEVVTGADGKPTEQVTVVSSKAVTSSS
AASSDGTITQLATDSLTPLPATTNTVTGPTAGTTTITGTDGKLTEQITVAPTGPVTTRTV
TGPTAGTGTVTGDDGLPTEQITVAPTGPVTTKTVTGPTAGTTTITGTDGKLTEQITVAPT
GPVTTKTVTGPTAGTTTITGTDGKLTEQITVAPTGPVTTKTVTGPTAGTTTITGTDGKPT
EQITVAPTGPVTTRTVTGPTGTGTVTGDDGLPTEQITVAPIGPVTTKTVTGPTAGTTTIT
GTDGKLTEQITVAPTGPVTTKTVTGPTAGTTTITGTDGKLTEQITVAPTGPVTTKTVTGP
TAGTTTITGTDGKPTEQITVAPTGPITTRTVTGPTAGTTTITGTDGKLTEQITVAPTGPV
TTKTVTGPTAGTTTITGTDGKPTEQITVAPIGPVTTKTVTGPTAGTTTITGTDGKLTEQI
TVAPTGPITTRTVTGPTAGTTTITGTDGKPTEQITVAPAGPVTTHTVTGPTAGTTTITGA
DGKPTEQITVASSKATTASDAASSSAAVASSSAASSDGKITQLATGSLTPLPATTNIVTG
PTAGTTTITGADGKLTEQITVAPTGPVTTKTVIGPTAGTETVTGEDGLPTEQITVAPISP
VTTQTVTGPTAGTTTITGTDGKLTEQITVAPTGPVITKTVTGPTAGTETVTGEDGLPTEQ
ITVAPTGPVTTKTVTGPTAGTTTITGTDGKLTEQITVAPTSPVTTKTVTGPTAGTTTITG
TDGKPTEQITVAPTGPATTKTVTGPTAGTETVIGEDGLPTEQITVAPTGPVTTKTVTGPT
AGTTTITGTDGKLTEQITVAPTGPVTTQTVTGPTSGTEIVTGDDGLPTERVTIASVASAA
QTNDNSETSGTDGDGRNAEASRTTLSETASTAEKTGSGHSDANNGGSTGDNGSDASNGGS
RGDSDSKGDSGSQGDSSKDDSSSKSDSGSGTGSDKSSNSGSSGSGTSSDAGKSENSSNGS
NSSGSSTSGSGKSDGSSNKSNGSSGSSGSGSGSGSSGSNSGSSGSNSGSSGSNSGSSGSN
TDSSHSSVVAQANSAVSVSVSATLVVAAGMALLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG