YALI0D13002g

Overview

Description similar to uniprot|O88068 Streptomyces coelicolor Putative dehydrogenase
Locus type CDS
Locus tag YALI0D13002g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1613123..1614054
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 932 (nuc.)
Previous locus YALI0D12969g Next locus YALI0D13024g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D13002g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D13002gYALI0D13002g_mRNA-001YALI0D13002g_CDS-001

Nucleotide sequence

 

>YALI0D13002g
ATGGTGAACCGACTTTCAGGAAAAAACGCAATTGTGACGGGCGCCGGGGGCGGAATCGGA
CTGGAAACGTCGATCCAGTTTGCCATTGAGGGCGCCAACGTGCTGCTGTCGGACGTGAAC
GAAGAGGCGCTGGCCAAGGCGCTGGCGGAGGTGAAGCAGCGGGCGGCCCAGGGCACCAAG
ATCGAAACGCTTAAGGCAGACGTGTCGGTGGAAACCGACGTCAAGGCGCTCGTGGACCAC
GTGGAGGCGTGGGGCGGCGTGGACGTCATGTTCAACAACGCCGGCATCATGCACCCCGCC
GACGACGGTATTCTCAACACGGACGAGAAGATCTGGGACCTGACGCAGAACATCAACGTC
AAGGGCGTCATGTACGGCTGCAAGCACGCCATTGCGTCGATTCTCAAGAACAAGAAAACC
AAAACGTCCATCATCAACACCGGCTCGTTTGTGGGGCTCATGGGCGCTGCTACCCCCCAG
ATTGCCTACACTACCTCGAAGGGCGCGGTGATCGCCATGTCGCGAGAGCTGGCCATTTGC
TACGCCAAGCAGGGCATTCGGGTCAACTCTCTGTGTCCCGGGCCTCTCAACACCCCTCTG
TTGCAGGAGTTTCTGGACACGGAGGACAAGAAGACGCGACGAACAGTCCATCTTCTTCGG
GCCGGTTCGGCGAGGCCATTGAGCAGGCCAAGGCCGCCGTGTTCCTGGCCTCCGACGAGT
CCACCTATGTGACTGCCCAGGAGTTTTTGGTCGACGGAGGCCTGACTCGAAGCTACGTGA
CTTCCGAGGGTCCTGCTGCCGAGGGTCCTGACAATGTCGTTTTCGGCAAGAAATGATGCG
AGACCGCTCGTCTGATCCGCCCACACACATGACCTAGTGCGGTATATAGATGTACCAAGA
GATGATGTAAGCAGCGAGGACTGCTGTAGAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D13002g_CDS-001

Protein length: 278 aa.
Product: Dehydrogenase, putative

>YALI0D13002g_CDS-001 MVNRLSGKNAIVTGAGGGIGLETSIQFAIEGANVLLSDVNEEALAKALAEVKQRAAQGTK
IETLKADVSVETDVKALVDHVEAWGGVDVMFNNAGIMHPADDGILNTDEKIWDLTQNINV
KGVMYGCKHAIASILKNKKTKTSIINTGSFVGLMGAATPQIAYTTSKGAVIAMSRELAIC
YAKQGIRVNSLCPGPLNTPLLQEFLDTEDKKTRRTVHLSGRFGEAIEQAKAAVFLASDES
TYVTAQEFLVDGGLTRSYVTSEGPAAEGPDNVVFGKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG