YALI0D12628g - POR1

Overview

Description uniprot|Q6C9A9 Yarrowia lipolytica YALI0D12628g POR1 Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation
Locus type CDS
Gene name POR1
Locus tag YALI0D12628g

Location

Species Yarrowia lipolytica Positions 1576073..1579197
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3125 (nuc.)
Previous locus YALI0D12606g Next locus YALI0D12661g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12628g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12628gYALI0D12628g_mRNA-001YALI0D12628g_CDS-001

Nucleotide sequence

 

>YALI0D12628g
ATGTCTTCCAAGGTCAAAGAGGAGGAGGGCGCCACCCCGGGCGGCTCAGGCAACGCCAAA
TTTGGCTATCGAAGGGCCAAGCCGCGAGCTTCCAGGGCTTGTGAGGTGTGAGTGAGAGAG
GAGGGAAGATTGTCAGACGGACGGATAGGTGGAGCTGATCGCGACGAACCACTCAGTACT
AACACAGATGCCATGCCCGAAAAGTCCGATGTGACGTTACAGAACGAATGCCGTGTACCG
TGAGTATGGTGGGGTGGAAGAAACAAACACTCCAGGAACAAAAGCGTTGTCGACGTGTGA
GTGACATGAGGCCATATCAACTAACATAGAATTGTCAAGCATTTGGATGCGAGTGCAAGA
TACCCGAAGTGAAGCGGAAAAAGAACGACAAAAAGGCGGCGGCAGAAAAGGTGGCGGACA
AGGGAACCAAGGACCGCAAACGACGCAAGACGGACGGCGGCGAGGAGTCCGACGAGGGCT
CCGTGCCCCCCCAGGCGCCCTCCAACGCGTCTTCCTCCACAGCGTCGTCGCCCAACACGG
CCCCCACTGCCCAGCAGCGGCTCATGCACTTTCAGCAGGAGACCAAACAGCAACAGTACC
AGCAACACGAGGGCGAGACGAAACCGGACGCCAACCCCAACCTCAGCGACTCGTCCAACA
CGTGGCTCAAAATGCTCGACTCCAAGGTGGTTAAACAGAGTGGCCGGGTGGCGTTTCTGG
GCTCCTCGTCCAACCTCAATCTGTTGTTGGACGCTAACCCGGATAATGAAGCCTACCACT
ACCCCTTGCCAGCCGAAATCACAGGTGGAAACCCCGTGTTCCATGAACTGGATCCCGAAG
AGATTGAGATTCTCAAACTGAGAGGAGCCTTCCTGTTACCTCCCCGAGAACTGTGTGACG
ACATTGTGGAGAGCTATTTTGAAAAGATCCACCCGGTCATCCCAATTGTCAACAGAACAC
AGTTCATGCGCCGCTACAACGACCCCGTCAACACGCCGTCGCTGCTGTTGCTTCAGGCCG
TTCTGCTGGCTGGTTCTCGAGTGTGCAGAAACCCGGCTCTACTGGACGCCAATGGGTCGT
CAGACCAGGCGTCGCTCACCTTCTACAAGCGAGCCAAGGCACTGTACGACTCCAACTACG
AAAATGATCGTATTTCAATTGTGCAGTCGCTGGCCCTCATGGGCTGGTGGTGGGAGGGTC
CCGAAGACGTGACCAAAAACGTCTTCTACTGGTCGCGTGTGGGTCTGTGTGTGGCGCAAG
GATTCGGTCTGCATCGATCTGTGGAAAACTCGTCGCTGTCGGTGGCCGAAAAGCGAATGT
GGAAGCGGGTGTGGTGGGTCATCTTTTTCCGAGACCGAGCCATCGCCGTATCTTTGGGGC
GACCTGTTATGATCAACCTGGAAGACTCGGATGTGCCAATGCTCACCGAAGACGATTTCA
TTGAGGACGAGCCTGACTACCCGTCTCCCTACCCCGTCAACAGACTCCACTCGCTCTATT
TTATTCACGCCGTCAAGCTGTCTGAAATCATGGGGCTTGTTCTGCGACAACAATTCAGTG
TGGGTGCCGAGCACTCGCACCGACTAAACCGAATTCCCGTCGTCTCGCACTGCGACATGG
CCATGGGCTCGTGGATGAACAACCTGCCGCCGGAGCTCAAGTACTCCGTCAAGGATATGG
GCTCTCACAACTTCTACAAGGCCCTGCTCCACTCACAATACTACACGATTCTGTGTCTTG
TGCACCGAAGCAACATTCTGCAACGGCGAACGTCAGAGGCTAACGAGAGCGCATACCCTT
CGTGGGGTATCGCGTTCCAGGCCGCTCACATGATTGCCAAAATCATGGAGAACATGTTAG
CGTATAACGAGCTGCGTGACACCCCGGCGTTCATGGTGTACACGCTCTTTTCGGCCATGA
TCATGCTTGTGTACCAGACCGAGTCCAAGTCGCCGTCGGTGGTTGAGTCTGCCAACCGGT
CGCTGGACGTGTGTATGAAGGCCCTGGAGGAATGCGGCAAGACGTGGGTGGTGGCACGAA
TGGTGCTCAAGCTTTTCAAGCACATGAACGAGTCGCAGCCCATTCGAAATCACATGGCCA
AGACCATCCGACGTCATGCTAGAGGCGTCAGCAAACCCGACGCAGCAAAGCAGCAGCAAA
TGCCTCAAGCTCAGCACCAGGCTTCACAACCACCACATGGCGCCCAACAGCACCATGCCC
AACAGCAACGACATGCCCAGCAACAACAACAACAGCAGCAGCATGCTCGACAGCAACAGC
AGCAGCAGCAGCAACAACAACAGCAACACACACAACAGCAACAACAGACGCATCAGCCAC
AGCCAGAACGCAAGTTCAACAATCATGCGTTTGACCAGCAGCAGCAATCGCAGCAGGAAG
GAGAGGAGTACCTGGGCGATAGACAGCCTCCTACAAATCCCGGCACCCCTTTCAACGGCA
CGCTGCCATCCAAGCCCGGCACCCCGCATCCGGACTTTTACTTTGTCACTAACACCCCGC
CGGCTTCGAACACCTTCTTTGAGTCGTTCCAGCCCATGCAGCTTTTCCCCGACGTGACTG
GCGATATGTCTAACCTGCAGTCGCAGCTCCAGGAGCCCGCCACCAGCGCGCTTCCTCCGG
ACATGTTTGCCCACGCCGACGGAGCCAGCCACACCGAAGGCGGCACCTACAAGTCGTCGC
CCGAGGACGAGCCCACCGCGGCCAGTGGATTTGGATACGCCCCTCAATCGCTCAATATTG
GCGACTGGTACCAATATCTGATGATGAACGGTGAAGGGGGTGCTGCTGCTGGCGCTGCTG
CTGGCACTGCTGCAGGCGCCCCTGGTTCTGTTCCTCCAGGTGCTCCTGCTGAGGCTCATC
CTGAAGCTGCCACTTCCAACTCTTGGAATGAGTCTCACTAAAGGAAAAAGAGAGGTTCAA
ATGAACTCGACGCTCGGTTCAAAAAAGAGAAGTGTTCTTCTCAAGTATTATAATATATAT
TGGTTTTATTGAGTGGGCTAGGGTTTTTGGGTGAATGTAGACTTTTAAAGGGGAACACAG
TGGGCCAGCTTGGGTTTGGTCCATGAAGTACGAGTATCGTATATAGTATAAAGACTAGAC
ATATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12628g_CDS-001

Protein length: 917 aa.
Product: Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation
Gene: POR1

>YALI0D12628g_CDS-001 MSSKVKEEEGATPGGSGNAKFGYRRAKPRASRACEVCHARKVRCDVTERMPCTNCQAFGC
ECKIPEVKRKKNDKKAAAEKVADKGTKDRKRRKTDGGEESDEGSVPPQAPSNASSSTASS
PNTAPTAQQRLMHFQQETKQQQYQQHEGETKPDANPNLSDSSNTWLKMLDSKVVKQSGRV
AFLGSSSNLNLLLDANPDNEAYHYPLPAEITGGNPVFHELDPEEIEILKLRGAFLLPPRE
LCDDIVESYFEKIHPVIPIVNRTQFMRRYNDPVNTPSLLLLQAVLLAGSRVCRNPALLDA
NGSSDQASLTFYKRAKALYDSNYENDRISIVQSLALMGWWWEGPEDVTKNVFYWSRVGLC
VAQGFGLHRSVENSSLSVAEKRMWKRVWWVIFFRDRAIAVSLGRPVMINLEDSDVPMLTE
DDFIEDEPDYPSPYPVNRLHSLYFIHAVKLSEIMGLVLRQQFSVGAEHSHRLNRIPVVSH
CDMAMGSWMNNLPPELKYSVKDMGSHNFYKALLHSQYYTILCLVHRSNILQRRTSEANES
AYPSWGIAFQAAHMIAKIMENMLAYNELRDTPAFMVYTLFSAMIMLVYQTESKSPSVVES
ANRSLDVCMKALEECGKTWVVARMVLKLFKHMNESQPIRNHMAKTIRRHARGVSKPDAAK
QQQMPQAQHQASQPPHGAQQHHAQQQRHAQQQQQQQQHARQQQQQQQQQQQQHTQQQQQT
HQPQPERKFNNHAFDQQQQSQQEGEEYLGDRQPPTNPGTPFNGTLPSKPGTPHPDFYFVT
NTPPASNTFFESFQPMQLFPDVTGDMSNLQSQLQEPATSALPPDMFAHADGASHTEGGTY
KSSPEDEPTAASGFGYAPQSLNIGDWYQYLMMNGEGGAAAGAAAGTAAGAPGSVPPGAPA
EAHPEAATSNSWNESH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG