YALI0D12496g

Overview

Description weakly similar to uniprot|Q12516 Saccharomyces cerevisiae YDL133W SRF1 Regulator of phospholipase D; interacts with Spo14p and regulates its catalytic activity
Locus type CDS
Locus tag YALI0D12496g

Location

Species Yarrowia lipolytica Positions 1559401..1561167
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1767 (nuc.)
Previous locus YALI0D12474g Next locus YALI0D12518g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12496g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12496gYALI0D12496g_mRNA-001YALI0D12496g_CDS-001

Nucleotide sequence

 

>YALI0D12496g
ATGCCCTCCCACGACTACGGCCCTCATGACATTCCGGTGGAGGCTTCAGACGGTGGTAAA
CAGACAAGTCAAGGTGGTTCTTTTGATACCGTCGATGAACCACCCCCTCCAGCCGCCAAC
AAGAAGATGAAAACCAGCGAGGAGCAACAAATACACGACCAGCCCGACTTTCCCGCAGCT
GTGTCGGCTTCCTACACGCCTGCTCCAACCTCCTCGCAATCCAACACCTCAGCATTAACA
TACACGGACACGCAAACCCACCCAACGTCACACATGCCGTCGGGACCCATGGGCGCATCG
TCTAGCGGTGAGATCCCGTTTCCAACCTACTCGTCGCCGCCCTCCAAGCCTCGCTCCAGA
GCGATTTCAGGGGGCACCACCGGAGTATCGTCTCGAAGAAACACGTCGTCGTCTTCGAGG
TCGCAACAGTACGAAACCAACTACAAACATGTGGCAAGTACCATCCCGGTGTGGCTCATC
GAAGATATTGGCGACCAGGAACTCTCACCGCAGGTCAACAACTCCAACTCCTTCCAAAAC
GACAGTGACCGTATCACGGAGATTGCCGAGGGAGACTCGGACAAGGCCATTTCCGACGTG
GACAACGGTGAGGGTGCGGCACCCACTCTGAATTGGAGACGGCGTCTGCCCACTTCCTCT
TTCAACTTTGCTTCACCACAAACCACAGCTCTACGGCCCCTGCAGGGAGTGCTGGTGGCC
CCGCTAAAACTGCATACCCACATTTTCCGCCACCACCGACTCAAGTACGTGCAGGGCGAG
TCCAAAAACAGATACGTGGAAACCAACCCCCATTATGAATGGGGCACTTTTGCTAACAAG
GTCATTCGACGAGACGTTCTGGGCAATGAAGAGATTGTGGATGTGTCGGAGCTGGAGGGC
CAGTACGACTTTGAGTCAAAGTACGGCGGCGACGACCAAGGCCAATTGGGATCCACGTCG
TGGTTCCTGAAACGAAAGCTCAAGGGCTTCATCAGCTTGTTCCGAAACATTGAGGACGAC
GACAAATACAAACGAGGCGCGGATCTCAACTTCCGGGAGTTTGTGTCCGAGAAGTCGCGG
CAATCGTGGAAACCAAAGTTCTACGTCATCTTGCTCAACGACCCCTACGTGCCTCTGACG
TTCCGAACCATCATGTTCTCTCTGTCATGCGTGGCTCTGTCTCTATCTGCATCTGTCTTT
GTGCATTCGAAGAATAACACGCCGATATCCATTCCCCAGCAGCCGTCGACGATTATGGCC
ATTGTGGTGCAGTCCATTGCACTGGTGTACATTGTGTACATTACGTACGACGAGTACTCG
GGCAAGCCTCTGGGTCTTCGAGATGCCGGCTCCAAGATCCGACTCATCATGTTGGATCTC
TTATTTATTATTTTCTCATCCGCAAATACGGCTCTTGCATTTAACACCATGTGCGACAAA
CGGTGGGTCTGTCGTACCGACCACGATCTCAGTGACCCGGACCCTATGCCCTACAACTAC
GCCATGTGTTCACGGCAGAAGGGTCTGGTTGCGTTTCTGCTCATGATTCTCTTTTCGTGG
GTCTCCACTTTTAGCATTAGTATCTTCCGTCTGGTAGAGCGTGTTGCTGGAGACAAGCAG
AACTAGACTAGACACAGCTCTCGGCACATCACAAGACATGGCATATACACTTTCCCATTT
AACCAGCATTCCACTAATACAGATACAGATAATAGAGAGTGTTCTGCAGGTACTTCATGT
ACCAGTACAGCACATACCATTACAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12496g_CDS-001

Protein length: 542 aa.
Product: Conserved hypothetical protein

>YALI0D12496g_CDS-001 MPSHDYGPHDIPVEASDGGKQTSQGGSFDTVDEPPPPAANKKMKTSEEQQIHDQPDFPAA
VSASYTPAPTSSQSNTSALTYTDTQTHPTSHMPSGPMGASSSGEIPFPTYSSPPSKPRSR
AISGGTTGVSSRRNTSSSSRSQQYETNYKHVASTIPVWLIEDIGDQELSPQVNNSNSFQN
DSDRITEIAEGDSDKAISDVDNGEGAAPTLNWRRRLPTSSFNFASPQTTALRPLQGVLVA
PLKLHTHIFRHHRLKYVQGESKNRYVETNPHYEWGTFANKVIRRDVLGNEEIVDVSELEG
QYDFESKYGGDDQGQLGSTSWFLKRKLKGFISLFRNIEDDDKYKRGADLNFREFVSEKSR
QSWKPKFYVILLNDPYVPLTFRTIMFSLSCVALSLSASVFVHSKNNTPISIPQQPSTIMA
IVVQSIALVYIVYITYDEYSGKPLGLRDAGSKIRLIMLDLLFIIFSSANTALAFNTMCDK
RWVCRTDHDLSDPDPMPYNYAMCSRQKGLVAFLLMILFSWVSTFSISIFRLVERVAGDKQ
N*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG