YALI0D12232g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D12232g

Location

Species Yarrowia lipolytica Positions 1522497..1524179
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1683 (nuc.)
Previous locus YALI0D12210g Next locus YALI0D12254g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12232g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12232gYALI0D12232g_mRNA-001YALI0D12232g_CDS-001

Nucleotide sequence

 

>YALI0D12232g
ATGATCATCAGCCTGACTGTGACCGTTAAAACGACGCTGTCGTGTGTGTTTGTGCTTCTG
CCGATTCCCGTGGCGGTTCTGGCGTTCGTGGCCGCTGCTCCGCTAACCTCGCCTTGGAGA
GCAGCCCTGTATCTTCAGGGAGCCGCCTCGGTGGCCCAAGCGGCGTCCTATGCGGCCTTT
CTGGTGCATAAGAAAGCCATTCCTGCGTGTGTCTTTTCGGCCTTTTTAGCCTGGCTGGCT
GGCATGGTCTTCTACGCTAAAGTAGTGAGAGATGTGGCCTTTGATGACAATAGCGGGAGT
GTTCTGGTGACCCATCACGCAGGCGTGACCACGGCCCATTTCGCCCTCTGGAGCATAGTC
GCAGCTCTGGCCGGCGCTTACACGCTGTTTGTGCTCATCTCCGAACACTCCAGCATCATT
GCCGCAATCGAAGGGCCCAACAGCACTAAGCCTAGTCCATCGACAATTAGCGTCGACCAG
TTCAAAGTAGACCCTGCCTCCACTGGAATGGACCTCAATATGAACACTAACAGCACAGTG
GCTAGAACCAACTCGGGAGGATATGCCGGCCATGCCCCTCACCACTCATACACAACAAGC
AACCACATGACAAACAACAACATCAACAACTACCAGGCTGGACTTACCCAGGAGCACCAT
GCAACTCCACTGTTGCCCAGCATGGAACCTGAACACGAAGAGGGTATAGACAATCCTACT
GTTGTGGTCAACTCTCTGGCGGGTTTAGAGGCCATTCCTGCCTCTGCGGGCTCCACTGCC
GAACCCACCTCTAGACACACTCAGAGCACTTCGTCGTTTGGATCCATCAACTTCGCCGGG
CTAAACATTCGACCTCCCCCCTCATCCAAGTTCATCCATCCTTCCTTGCAGATTCGTCAC
AATGGTAGAAGAATGGATCGACTGCGACACAGCATTGATGAGCTCAGTGACGGCCATGTG
CGCTGCGATTCAGCAGGAAAATTTGACTCCTCGGAACTAGCTGGTCCTAGCCGAGAGTCA
GGAGAAATAAACACCTCCCATCATCGGTACTCTACCGAACTTCATACAGGCACTCAATCG
GTGTTCTCCACAGCTACCACAGCCACTGAACTCACGGTCAAGTCACCCGCAGAGCCACTT
CACCCCCACACTAATATTGCTCCCTCTTCCACTCCCCCCAACCCTTCTTCTCCCACCAAG
TCGACCCACGGCTCCATCTACAACTCTGCCCACAATTCCCTCAGTTCGTCGCCTGCCAAA
TCGTGCTCGCCCCGGAAACCCAGTCGTCTGAGCAGGCTTAGTCGATTATCACTCAGTCTG
GAAGGACTCAACGACATTTCGCCCAAAAAGCTGCGAAAGAGCCGCTCGGATTTCATTCTG
CCTGGGTCCAGAGACAAAAACGACACTCCCGGCAATGTAACCACCCCCCAGCCGGACGAG
TTCAACCAGTGGGAGATCCAGGACGTTGCGTGGAACCTGCGAAACGTGTCTGGCTCTTCC
GCAGATACAGATGGCACTCGGCAAGACGGTCAGCGCTCGGCAAGCACCGCCTCCAGTGGT
GTGAACATCATTTCCAGCCGGGGCTTTGTCCGAGAAGAGGTTGTTTGATCTTCCAAGACA
TTCCGACACTCTCACACCTCTTCTCGGTATATATTTATAACTATTGCATTGCATATTCGT
ATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12232g_CDS-001

Protein length: 536 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D12232g_CDS-001 MIISLTVTVKTTLSCVFVLLPIPVAVLAFVAAAPLTSPWRAALYLQGAASVAQAASYAAF
LVHKKAIPACVFSAFLAWLAGMVFYAKVVRDVAFDDNSGSVLVTHHAGVTTAHFALWSIV
AALAGAYTLFVLISEHSSIIAAIEGPNSTKPSPSTISVDQFKVDPASTGMDLNMNTNSTV
ARTNSGGYAGHAPHHSYTTSNHMTNNNINNYQAGLTQEHHATPLLPSMEPEHEEGIDNPT
VVVNSLAGLEAIPASAGSTAEPTSRHTQSTSSFGSINFAGLNIRPPPSSKFIHPSLQIRH
NGRRMDRLRHSIDELSDGHVRCDSAGKFDSSELAGPSRESGEINTSHHRYSTELHTGTQS
VFSTATTATELTVKSPAEPLHPHTNIAPSSTPPNPSSPTKSTHGSIYNSAHNSLSSSPAK
SCSPRKPSRLSRLSRLSLSLEGLNDISPKKLRKSRSDFILPGSRDKNDTPGNVTTPQPDE
FNQWEIQDVAWNLRNVSGSSADTDGTRQDGQRSASTASSGVNIISSRGFVREEVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG