YALI0D11726g

Overview

Description similar to uniprot|Q07800 Saccharomyces cerevisiae YLL010C (ohnolog of YLR019W) PSR1 plasma membrane phosphatase involved in sodium stress response
Locus type CDS
Locus tag YALI0D11726g

Location

Species Yarrowia lipolytica Positions 1455736..1457648
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1913 (nuc.)
Previous locus YALI0D11704g Next locus YALI0D11748g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11726g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11726gYALI0D11726g_mRNA-001YALI0D11726g_CDS-001

Nucleotide sequence

 

>YALI0D11726g
ATGACCACCAAATACCACAAACCCGACACGACGTCGTCGGCGTACGGACCTAATGCCGCC
ACCAGTGCAGCCCAGAGAGCCGCGGCAGCGTCTTCCACAGCCGCCACCCCGACACAGCAG
TCCCCAGCAGTGTCCGCAGAAGTAGGCGACATCTCCTCCAGACCCGTTTCAGGAGTCGAT
TCGCTCTCACCCTCCAAGCCAGACGAAGTAGAGCCCCCCAAGGCCGTCGTCACGGAGCCC
GAGCCCACCACAGACGTGACGCCTATCCCAGAGGCTGTCGTAGTTCCTCCTTCTTCTGCA
TCCCCCAACACCAGGCCTGTGGCCTCCAACACGGCATCGCACTCAAAGGCAGCTGCCCAG
GCGGCCCCTAAGCAGGCGCAGAAGACGTCGTCGGCCGCGACAAACGCCGCAGTCGCCGCT
GCATCGGGATCCGGGTCGGCTCCCCACCAGCCGCCCAAACGCCCCGGACACCAGCCACAG
AAACCGGCTGCAGCCGACGAAGGCTTCATGTCCAAGCTGTGCTGTTGTTTCAGCTCTTCC
GAGCCCGAGTACGACACGCAGACCCGACCTGCAACCGCTACTGGCGCTGGAGCTACTGCC
TCCGCCTCATCTTCCACAGCTTATGAACCCAAGGTGATGGCCAGACCGGCAGCCAAGGAC
GCTGCCAGTGAGCGAAAGGATCAGCAGCAGCAGCAACAGCAACGGCAGCAACAGCAGCAA
CAACATAATGTCGACAGGCATGCTACTGACAATCAGGTCTCTCCTCAGGCGCACTCTCAC
GGCACAGGGGCCACTGGTGCTGTCGGTGCCGGTGCCGCCGTCGGTGCTGCTGGTGCCGCC
GCTGTGGCCGCAACCACTGCACCTGCTGAGGCTGACACCCACGACGCCCACACAGCTAGC
AACGCGGAACTTCAGGCCACACAAGTGGACAAGCTGGCAGACGACTCGTCTGCGTACGAG
CTCAGCGACGTGATTCCTGCCAGCCAGGCGTCCGAGTTCTCCTCGGACCCGCGCTACTTT
GCCCCCTCTCAAGGATGGCTCCTCAACCCCGTCAGCGACCAGCTAGCCGGACGCAAATGC
CTCGTGCTTGATCTGGATGAAACGCTCGTGCACTCGTCGTTCAAGTACATCCACCAGGCG
GACTTTGTCATCCCCGTGGAGATTGAGGGCCAGTATCACAACGTTTATGTGATCAAGCGT
CCCGGCGTGGACGAATTCATGAAGCGGGTGGGCGAGCTGTACGAGGTGGTCGTGTTCACG
GCCTCTGTGAGCAAGTACGGCGATCCTCTGTTGGACCAGCTGGACATCCACAACGTGGTG
CATCACCGGCTGTTCCGAGAGTCGTGCTACAACCATCAGGGTAACTACATTAAGAACCTA
TCGCAGCTCGGCCGGCCTCTTAAGGACGTGATTATTATCGACAACTCGCCTGCATCTTAC
ATTTTCCATCCCCAGCATGCCATTCCTGTGAGCTCTTGGTTCTCAGACGCTCATGACAAC
GAGCTCTTGGACATGTTGGACTTTTTGGAGGATATGTCTAAGCCGAAGGTGGAGGATGTG
TCTCTTGTGTTGGACGTCAACATGTAGGTGCGACAAGAGATGCGGCGCCCTACGCTTGAG
GGTGCGCGCGCTAAAACCTTGAGGATGTGCATCCACGAGGAGTGCATGATGCGGGAGTCG
CGGCATTGATCTGGTTATCGTGGAATGGTGCCCATTCATCGTGCAATGCTCTCATGAAAA
AGGTGTACAAAGGAGAGGACGTGGCTGTGTTGCATAGTCAATAGCGTCCTGATGCTACAA
GTGTCTGCATGCTAGAATGGCAGCGCCTTAGGTGCTGCTCAAAACTATATATACATCTAT
ATATATCGCCTAGAGCGACTAATGTAATTAATTTAATTTATTACCACTTTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11726g_CDS-001

Protein length: 529 aa.
Product: Plasma membrane associated protein phosphatase, putative

>YALI0D11726g_CDS-001 MTTKYHKPDTTSSAYGPNAATSAAQRAAAASSTAATPTQQSPAVSAEVGDISSRPVSGVD
SLSPSKPDEVEPPKAVVTEPEPTTDVTPIPEAVVVPPSSASPNTRPVASNTASHSKAAAQ
AAPKQAQKTSSAATNAAVAAASGSGSAPHQPPKRPGHQPQKPAAADEGFMSKLCCCFSSS
EPEYDTQTRPATATGAGATASASSSTAYEPKVMARPAAKDAASERKDQQQQQQQRQQQQQ
QHNVDRHATDNQVSPQAHSHGTGATGAVGAGAAVGAAGAAAVAATTAPAEADTHDAHTAS
NAELQATQVDKLADDSSAYELSDVIPASQASEFSSDPRYFAPSQGWLLNPVSDQLAGRKC
LVLDLDETLVHSSFKYIHQADFVIPVEIEGQYHNVYVIKRPGVDEFMKRVGELYEVVVFT
ASVSKYGDPLLDQLDIHNVVHHRLFRESCYNHQGNYIKNLSQLGRPLKDVIIIDNSPASY
IFHPQHAIPVSSWFSDAHDNELLDMLDFLEDMSKPKVEDVSLVLDVNM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG