YALI0D11671g

Overview

Description similar to uniprot|Q9USY1 Schizosaccharomyces pombe carbohydrate kinase
Locus type CDS
Locus tag YALI0D11671g

Location

Species Yarrowia lipolytica Positions 1448607..1451014
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2408 (nuc.)
Previous locus YALI0D11638g Next locus YALI0D11704g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11671g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11671gYALI0D11671g_mRNA-001YALI0D11671g_CDS-001

Nucleotide sequence

 

>YALI0D11671g
ATGCTTTCAATTCGACGAATCGCAAGTCAAAAGCCGATTTTCCAAACTTTGGTTTTTCGC
CAGTTTGCCACCGCCCCACCCAGATCGCCCCTCGTCATCTCGGAGGAGATCCAGCAGGCC
ATCAATGACAAGAAGCCCGTGATCGCACTGGAATCCACCATCATCACCCATGGGCTGCCA
TATCCTCAGAATCTGCAGATGCATAGCGATACGGAGCAGATCATTCGTAAGGAAGGCGGA
ATCCCCGCCCTCACGGCTTTCGTCAACGGTGTGCCTCGAGTGGGAGTTCCTGAGGAGGAG
GTCAAGGTGCTGGCCGAAAACACAGACGGAAACCACATCAAGGTGTCGAGACGCGATATT
GGCTACGTCATGGCAAATGGACTCATGGGAGGCACCACCGTGGCTGCCACCATGATTCTG
GCTCACATGGCAGGTATCAAGGTGTTTGCTACCGGAGGCATTGGAGGAGTGCATCGAGGT
GCGGAGTCGACATTTGATATCTCTGCCGATCTCGACGAGCTGTCCAATACCCCCGTGGCT
GTGGTCTGCGCTGGCCCAAAGTCCATTCTCGACATTCCTCTGACCGTTGAGTACCTGGAG
ACCAAGGGCGTGCATGTGAGCACCTATGGAGCCGACGGGACAAACATTCCTGGATTCTTC
ACCACCGATTCGGGCGTCAGCAGCCCCTACAACTTCTTCGACACCCTGGAGGCCGCTAAG
ATCATCCAAGCTAACTCCTCGATGAACCTCCAGTCCGGAACGGTCTGGTGTGTGCCTCCT
CCCGACCCCATCCCTTCCAACCTCATCCATGACGTGATTGACCAGGCCCTGGTGGAAGCC
AACGAGCTGGGCATTAAGGGTAAGGCTACGACCCCCTTCCTTCTGGACGCCATTCGACGG
GAATACCCCGAGGTGCTCAAAACTAACATTGGACTGGTCCAGCAGAACGCCGTTATCGCG
ACCCGTATCGCCAGCGATCTGGCAACCCTAGAGGTAGGTGGCAAGTTTGAATACTGAACA
CATAGTGAGTGACAACTAACACATAAACCAAATACTAATATAGAGCGGTAGACCCACAAG
TGGAGGTTCTGGCTTCATGCCTGCTTCCCCTAGTGTCCCCAAAAAGGCTGCTAGACCCCA
AACCATCACGCCGCTGGCTGTAGTTGGTGGAGTGGCGATGGACGTAACATGCGGTATTTC
TGGCTCACAGCTGGGCACTTCTCATCCCGGAAAGGTGACCAACTCAATTGGAGGTGTGGG
TCATAACATCGTTCTGGCTATCCATTACACTGGGTCCAAGCATGGTATCTCCCCACGGCT
CATCTCGGCAGTGGGTCAGGACGGGGATGGAAACGAGATTTTATCGCACATGGAAAAGGT
GGGTTTGGATACCAGTGGCATCAAGCAGGACTCTAAGGAGGGAACAGCCAGATATGTGGC
TATGCATGACAAGAACGGAGACCTCGTTGTGGCATGTGCGGATATGGACATTATCCAGAA
CCTCGACGTGGTTCATATTGGCCAGCAGCTTACTACAGCTCAGCCAAAGTGGATCATGAT
GGACGGAAATATCGGACTGGAGGCCAAAAAGGAGGTGCTCAAATACGCACGGGACAAGTC
TGCACAGGTGGCATTCGAACCCACGTCTGTCCCCAAAGCCGCTGCTCTTTCCGAGCTCAA
TCTGCCCGTTTACCCCAACAACTCCATTGCCTTAGCCACCCCCAACACTGCAGAGCTCGA
GGCCATGTTCGAGGCATTCCACGAGAAGGGCCGATTTGACGTTGACGACTGGTTTCCAGT
CATAGACGGTCTTGCTCTCGGAGCTGACTTTAGAAACGGAGCCACCATGTTGTCGCACCA
ACATCGTGGACTCAAAGCTATTCTCGAACAAGGAACTCTGGCCCAGGCAATCCACATGCT
ACCATACATCCCAACTTTGATCATCAAGGGCGGAGCCAACGGCGTCGTCGTCTTCCAACT
CATTGATGATATCGAGTCTGCCATTCATTCACAGCGTTCTGCTTCCAATAAAACGCCTGG
CCTGTTCCAGAAGGGCAACGCTGCGAGTGGAAACACCAAGGTCGGCGTCTACATGCAGTA
CTTTGAGCCCGAAGAAGTGGGCAGTCAGTCGATTGTAAGCGTGACTGGAGCTGGAGACAC
TCTGTTTGGAACCCTGGCCATGGAGATTGTCAAGGACGAGTCCTGGTTGAACGATATGGG
AGACAAGAAGAGTGCAGTTGTTTCTCGAGCCATGAACAATGCTGTGAAGACTATTCAGAG
TAAGGACGCTGTCTGCAAGAGCATCCTTTAAGTGATTTGCCATGCTTTCTCTTCTTCCAC
GATGTAAATACTTATTTTACACACTACTGTGCAGTAGCAAATACAGAACAAGAGTTGTCG
CCTATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11671g_CDS-001

Protein length: 747 aa.
Product: Carbohydrate kinase, putative

>YALI0D11671g_CDS-001 MLSIRRIASQKPIFQTLVFRQFATAPPRSPLVISEEIQQAINDKKPVIALESTIITHGLP
YPQNLQMHSDTEQIIRKEGGIPALTAFVNGVPRVGVPEEEVKVLAENTDGNHIKVSRRDI
GYVMANGLMGGTTVAATMILAHMAGIKVFATGGIGGVHRGAESTFDISADLDELSNTPVA
VVCAGPKSILDIPLTVEYLETKGVHVSTYGADGTNIPGFFTTDSGVSSPYNFFDTLEAAK
IIQANSSMNLQSGTVWCVPPPDPIPSNLIHDVIDQALVEANELGIKGKATTPFLLDAIRR
EYPEVLKTNIGLVQQNAVIATRIASDLATLESGRPTSGGSGFMPASPSVPKKAARPQTIT
PLAVVGGVAMDVTCGISGSQLGTSHPGKVTNSIGGVGHNIVLAIHYTGSKHGISPRLISA
VGQDGDGNEILSHMEKVGLDTSGIKQDSKEGTARYVAMHDKNGDLVVACADMDIIQNLDV
VHIGQQLTTAQPKWIMMDGNIGLEAKKEVLKYARDKSAQVAFEPTSVPKAAALSELNLPV
YPNNSIALATPNTAELEAMFEAFHEKGRFDVDDWFPVIDGLALGADFRNGATMLSHQHRG
LKAILEQGTLAQAIHMLPYIPTLIIKGGANGVVVFQLIDDIESAIHSQRSASNKTPGLFQ
KGNAASGNTKVGVYMQYFEPEEVGSQSIVSVTGAGDTLFGTLAMEIVKDESWLNDMGDKK
SAVVSRAMNNAVKTIQSKDAVCKSIL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG