YALI0D11627g

Overview

Description similar to uniprot|P34087 Saccharomyces cerevisiae YDR404c DNA-directed RNA polymerase II 19 kDa polypeptide
Locus type CDS
Locus tag YALI0D11627g

Location

Species Yarrowia lipolytica Positions 1445279..1446226
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 948 (nuc.)
Previous locus YALI0D11616g Next locus YALI0D11638g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11627g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11627gYALI0D11627g_mRNA-001YALI0D11627g_CDS-001

Nucleotide sequence

 

>YALI0D11627g
ATGTTTTTTGTTGTGAGTATGGGAAGGCGAAGCAGGCGCAAAGACATGAATGGATGATGT
CAGACGGGTGGAATCACGTGTTCAGACACCAGATCGGCCCGTGATTCGATGGGCTGTGGT
ATGGTGATGTTCGACGACGAGAGAACGGTGGATGGTGTCATGTCCGTGGTGTTGAGAGGT
GAGGGATGGAGGAGTGAGCATGTGACGAAGTCTCCTATCTCAGCTGAGTGTCTACTCGGT
TCTTCAGCTGTACACATGACATAACACTTTCAGCACGGAACCACACGAGCACGAGCACCA
CAAGCGTGTTGTTTTATCCTACAAATTTGAAGCCTCTACCAGGCGATGGACGGGCGATGG
AGACTCCAACGGAGCTTGGCACAACGAGGTTGCCAAATTTCCACAGAACTAACGCAGAAA
GACTTGACGCTCTCTCTGACTCTGCATCCGTCATACTTTGGCCCCCAGATGGGCCAATAC
CTGCGGTCCAAGCTGCTGGCGGACGTGGAGGGCACTTGCACCGGAGAATTCGGCTACATT
CTGTGCGTGCTGGACCAGCCGTTCGACATTGGCAAAGGCAGAGTGGTGCCTTCCAACGGC
TCGGCCGAGTTCACAGTCAACTACCGAGCCATTGTGTGGAGACCGTTCAAAAACGAGGTG
GTGGATGCGATAGTGACCAACGTGAACAAGATGGGCTTCTTTGGCGACGTGGGCCCCTTG
TCCGTGTTTGTCTCGTCCCATCTGATTCCTCCTGACATGAAGTTCAACCCTAGCGCAAAC
CCACCAGCATACGTCAGTGAAGATCAGGTCATTGAAAAGGGAAGTCGGGTGCGACTGAAG
ATTGTCGGAGTGCGAGCCGACGTGGGAGAAATGTTTGCCATTGGTACTATCAAGGAGGAT
TATCTGGGTTTGGTCTAGTGTACTATAATACATATTTATATGAACTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11627g_CDS-001

Protein length: 171 aa.
Product: RNA polymerase II subunit B16, putative

>YALI0D11627g_CDS-001 MFFVKDLTLSLTLHPSYFGPQMGQYLRSKLLADVEGTCTGEFGYILCVLDQPFDIGKGRV
VPSNGSAEFTVNYRAIVWRPFKNEVVDAIVTNVNKMGFFGDVGPLSVFVSSHLIPPDMKF
NPSANPPAYVSEDQVIEKGSRVRLKIVGVRADVGEMFAIGTIKEDYLGLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG