YALI0D11440g

Overview

Description weakly similar to uniprot|G4NBA5 Magnaporthe oryzae hypothetical protein MGG_00589
Locus type CDS
Locus tag YALI0D11440g

Location

Species Yarrowia lipolytica Positions 1430092..1431029
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 938 (nuc.)
Previous locus YALI0D11418g Next locus YALI0D11462g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11440g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11440gYALI0D11440g_mRNA-001YALI0D11440g_CDS-001

Nucleotide sequence

 

>YALI0D11440g
ATGTCGCAAGCGACCAATAAATACTACCCGCCAGATTACGACGGCAAGTCGTCCGCCAAC
CAGCTTGCGGGAGCGAATCCGCGCAAACCAACTGTCAGATTCGAGCTTCCTCTGTCTGCC
AAATGCCATGGATGTGACAAGACCATAGCTCAAGGAGTACGGTTCAACGCGGTCAAAACA
CGCCACGGCAGCTATCTGTCGTCTCCCATCTGGCGCTTTGATATCAAACATGCTGAGTGT
GGACATCCCATTGTCATTGAGACGGATCCGAAGAACGCTACCTACGTGACCGTAGAAGGA
GCTACCTTCACACAGTCGGTTGTGAAGAGAGAGGAAGAAACTCCAAGCAACCCTTTTGAG
GCGGTCGAGCGTGAAGTCGTCAAACAAAGGGCTGCAAAGGCCGAGGAGGAGCTCAAACAA
CGTCATATTAAGTCCGAAGACAGCAGAGAGACAATCGCTGAATGGACCTTCAAATCGTCG
GTGCTTTCGGCTGATGACGCGGCCAAAGAGACACAGAAAATGTATGATGAACATCTGGAC
AAAGCCAGATACCACCAGGACCTGTCATATAAGATGAGGAACAGGTTCAGAGGTCAAAAA
CGCGCATTGGAAGCCCAAGACCAAAGAGACAACCTTCTCAAGGACAAAATGGGACTTCTG
CGGGATCTACCTCTTGCTAAGGAAGCGCAAGTGATGGTTCCTCACCTGGAAAGGGGTTTA
GTGGCGGAGCAAGAACTCAGGTTGAAGTCTCTATCCCACGGTGGACTGTTTGATTCTACC
AAGCAGAAAGGATCACTTGCACAACAAACTAGAGAGCTCTCCAGAACGCTACAGTCTAAG
CCACGGCCGAAATTGAAACTCAGAGGGATCAAGAAACCGGCCAAACAATAATGCCAGTAT
ATACTGTACTTTTACTACTATTTATTCTTATTACACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11440g_CDS-001

Protein length: 297 aa.
Product: Conserved hypothetical protein

>YALI0D11440g_CDS-001 MSQATNKYYPPDYDGKSSANQLAGANPRKPTVRFELPLSAKCHGCDKTIAQGVRFNAVKT
RHGSYLSSPIWRFDIKHAECGHPIVIETDPKNATYVTVEGATFTQSVVKREEETPSNPFE
AVEREVVKQRAAKAEEELKQRHIKSEDSRETIAEWTFKSSVLSADDAAKETQKMYDEHLD
KARYHQDLSYKMRNRFRGQKRALEAQDQRDNLLKDKMGLLRDLPLAKEAQVMVPHLERGL
VAEQELRLKSLSHGGLFDSTKQKGSLAQQTRELSRTLQSKPRPKLKLRGIKKPAKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG