YALI0D11176g

Overview

Description similar to uniprot|P47169 Saccharomyces cerevisiae YJR137c ECM17 involved in cell wall biogenesis and architecture
Locus type CDS
Locus tag YALI0D11176g

Location

Species Yarrowia lipolytica Positions 1401175..1405776
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4602 (nuc.)
Previous locus YALI0D11154r Next locus YALI0D11198g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11176g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11176gYALI0D11176g_mRNA-001YALI0D11176g_CDS-001

Nucleotide sequence

 

>YALI0D11176g
ATGCCTTCGGCCGAAAACCTCAATGGAGGACTGCAACAAGCAGGTGAGTAGCATGCGGGA
GCCGCCCTTACACCATCGCCGTCCTTCCCCCCAAGTTCCTTGCCATGTCTTGATTTTCAA
ATCGCACTTTTCGATCCTGCTGATTTGTCGCCCATGCTCTGTGACTGACGGCTCAAAATA
GTTGGGCCAGACTGTCTGCAACAAGTTGACGTCTTGCCGACATTGTTTCCCGATACGAGG
GAGGGTGCGCGATATGAAAGCCAAAATAAGCGAAATGAAATCAAATGAGCAACTGAACAA
GGAAAACGCACCAACGAACACCAACGAATACCAACGAACACCAGCGAACACCCATTCTAA
CCCAGTCCTTCACACTGCTTCAAATGCAGCAGATCAGACCTTCGAGGTGGTGCGAAAGCT
CACCCCCGAGGCCTCCACAATCCAGATCAGAGAATCCGCTGATCCTCTAGCACACATTGT
CAACTCACCTGCAGCAGCAGACTCGCTTCTGGCGGTTGTCGCATCGTCTCACGTGCTCGT
GAAGGGCCTGGCTCACCTTTCTGCCTTTAAGAACCGAGCTGTTGTTTTCCATGTTGAGAC
CGGCTCCGACTACAACGACATCGCGGCCATTCGACACTCGCAGTACGTTATGCTGCAGTC
TTTTGGCCTCGAGGACGTCCAGGAGGTGGCCATCAAGGCCTACGAGGTGTCCAAGGCCAC
CGGCCAGCCCGTGATCCACTTTTACGCCCCCGTCGAGGGCGAGGTTTCGCTCATTCCCGG
AAACGAGATTGTTTCCAAGGTTGAGAAGGTTGAGACAGACAGCGAGAAGCAGCTCGAGCA
GCCCATCATTGCTCCCCAGTACATTGGATCCTCTTCCGCTCCCTCCGCCCTCATCGTTTT
TGGCTCCTCCACACAGCTCTTCATCGACAACGTCAAGGCCCACAGCCAGACCGGCCTGGT
GCTTGTGCGCCAGTACCGACCGTGGTCTGTTCAGGCCATTCTTAATGTGCTGCCCAAGTC
TGTCAAGACCCTGGGTCTGGCCGAGCAGATCAAGTCGCGAACTACCGCCTGGTCGCCCCT
GGTGCTCGACTACGTTGCCGACATCCACGCCTCTGGCATTGACCGAGACTCTGCCCCCAA
GCCTGTTGCCTTCCATCTGGGCCAGGTGACTGAGGCTACTGTCAACCACGTGTTTGCCGC
CATCTCCTCTAACCTCACATCTGCCTCTCCAGTCCAGAACCTGACCGTTGGCTCTGGCGT
GACCCCCAACGAGACCAAGGAGGAGGTCAAAGCTGAGGCTCTCACCCTCGAGACCGCCTA
CACCAAGATTCTGCACGAACTCTTCAAGGAGGTCAACATCATCAACGCCTCTGACAAGAA
GGACGCTGGTCTGACTTCGCCCGAGTATGGCTACGGAGCCTACCTTGCATACCAGGAGAA
GCGAAAGGAGCTGTCTGAGCGAGTGCGAACCGCTATTCGAAAGAACGAGCTCGGTGAGGA
GCTGCACAAGCTGCTGACCATGTGGGCCATTAACCGAGAGGTCGACGTGACTGACATCAT
TTCCAAGCTCGAGGCCAAGGGTGCCAAGGACCTCCTCGAGCTCAAGGAGTACTTTGAGAA
CAAGAGTAGCTGGCTGATTGGTTCTGATGCCTGGTCCCACGACCTTGGAAACTCCGGTGT
CCACCACGTTGTCTCCTCTGGCGAGAACCTCAACATGCTCATCATCGACTCTACTCCCTA
CGACACTGCCCAGTCCAAGCTGCCCTCTCTGAGAAAGAAGGACATTGGTCTGTACGCCAT
GGGCTTTGGTAACGTCTACGTGGCGTCCACCGCCGTCTACGCCTCTTACACCCAGGTCCT
GCAGTCGCTGATCGAGGCTGCTGCCTTTGAGGGACCCTCTGTGGTTCTGGCTTACCTGCC
CTACCACTCCGAATCCGACGACCCCGTCTCCATTCTCAAGGAGACTAAGCGTGCCGTCGA
CTCTGGCTACTGGCCTCTGTACCGATACGACCCCTCTCTGGAGGCTAAGGGCCAGGAGCC
TTTCCAGCTGGAGTCTTCTCGAATCCGACAGGATCTGCAGAAGTTCCTGGACCGAGAGAA
CAAGCTTACCATGCTGTCCAAGAAGGACCCTGTTCTGGCCCGAAACCTGGCCCAGGGCTA
CGGCTCCGGTCTGCGAGAGCTGCAGCAGCGAAAGGCCAAGGATGCCTACCTGCAGCTGCT
TGACGGTCTCTCTGGCGCCCCCATCACTATTCTGTTTGCCTCCGATGGTGGTGTGGCCGA
GAACGTGGCCAAGCGACTCGGTCGACGAGCTAAGGGCCGAGGTCTTAAGCCTCTCGTCAT
GGCTATGGATGACTTCCCTCTGGAGGACCTGTCTTCCGAGACCAATGTAGTGTTCATCAC
CGCCACCGCTGGTCAGGGTGAGTTCCCTCAGAACGGCCGAAACTTCTGGGAGGGTCTCAA
GGGTGCCACCGATGTGGATCTGACCAACACTCGAGTGTCCGTCTTCGCCCTCGGTGACTC
TCTCTACTGGCCCCGAAAGGCCGACAAGCACTACTACAACAAGCCCGGTAAGGATTTGCA
TGCCAAGCTGGTGCTGTTTGGTGCCCAGGACCTGGCTCCTCTGGGTCTTGGTGATGACCA
GGACGCCGACGGATGGAGTACCGGTTACAACGAGTGGGAGCCTGCTGTGTGGACCGCTCT
TGGTGTTGACGGTATTGGCGCCATTGACGAGCCCCCGCCAATCACCAACGAGGACATCAA
GGCCGCCTCCAACTACCTGCGAGGTACCATTGCCGAGGGTCTTAAGGATGAGTCCACCGG
CGCCATTTCGGCTCACGATCAGCAGCTGACCAAGTTCCACGGTATCTACATGCAGGACGA
TCGAGACATTCGAGACGAGCGAAAGGCCGCCGGTCTGGAGCCTGCCTACTCTTTCATGGC
TCGAGTTCGACTCCCCGGTTGCCGAGCTACCCCCGAGCAGTGGCTCAAGATTGACGAGCT
GTCTGACTCTCGAGGAAACGGTACTTTCAAGATCACCACCCGAGCCACCTTCCAGTTACA
TGGTGTTGTTAAGCACGACCTTAAGCCTGCCATTCGAGGCATGAATGCTGTTCTCATCGA
CACTGTCGCCGCCTGTGGTGATGTCAACCGAAACGTTGTCACTGCTGCTCTGCCCGAGAA
CGCCAAGGTCCACGACCAGGTGGTGAAGCTTGGTACCGACATCTCCGAGCACCTTCTGCC
CATGACCACCGCTTACTACGAGATTTGGCTTGAGGGAGCCGATGAGTCCGATAAGCAGAA
CATTGGTGCCCCTGAGATTTTTGACAAGCGAGAGGGAGGCCCCAAGAAGAAGCCCAAGAA
GATCCAGGTCGGAGAGTCGACTCTCAAGGACATGGAGGAGATCAAGGACACCGAGGAGCT
GTACGGCGAGCTGTACCTGCCCCGAAAGTTCAAGATCAACGTGGCTGTGCCTCCCTACAA
CGATGTTGATGTTTATGCTCACGATATTGGTCTGATTGCCATTGTCGAGAACGACGTCAT
TATCGGTTGCAACGTTCTTGTTGGTGGAGGAATGGGTGTCACTCACAACAACACCAAGAC
CTATCCTCGAACCGGTTCCAACCTGGGTTTCATGCCCTATGACAAGATTGTCGACACCTG
CGAGAAGGTCATGCTTGTGCAGCGAGACTTTGGTGACCGAACCAACCGAAAACACGCCCG
TCTCAAGTACACCGTCGACGATCTCGGTGTCGACGTGTTCAAGGGCAAGGTCGAGGAGTA
TCTGGGTTACAAGTTCGAGGATGCTCGAGACTTTGAGTTCAAGTCCAACACCGACTACTT
TGGCTGGGTCAAGGACGAGCGGGGACTGAACCACTTCACCTCCTTCATTGAGAACGGTCG
AGTTGAGGACACTCCTGAGCTGCAGTTCAAGACAGGTCTTCGAGAGATTGCCAAGGCCAT
GACTGGCAAGGCCGAGTTCCGACTCACCGGTAACCAACATGTGCTCATCTCCAACATCAC
CGACGAGGAGCTTCCCAAGATCAAGGATCTGCTCAAGAAGTTTAAGCTAGACAACATCAA
CTTCTCCGGTCTGCGACTCTCTTCTGCTGCCTGCGTCGCCTTCCCTACTTGTGGTCTGGC
CATGGCCGAGTCCGAGCGATACCTGCCCGTGCTCATCACCAAGCTGGAGGCCGCTCTGGA
GGAGTACGGTCTGCGACACGACTCCATTGTCATGCGAATGACCGGTTGCCCCAACGGTTG
TGCCCGACCTTGGCTTGCCGAGGTGGCTCTGGTTGGAAAGGCCTACGGAGCCTACAACCT
GATGCTGGGTGGTGGCTACCAGGGCCAGCGACTCAACAAGCTCTATCGATCTTCGCTCAA
GGAGGATGAGATTCTGGACATTCTCAAGCCTCTGTTCAAGCGATGGTCTCTGGAGCGAAA
CGATGGTGAGCATTTTGGAGACTTCCTTATCCGAGTTGGTGTCATCAAGGAGACCACTGC
CGGAAAGAACTTCTGGGAGGGCGTCGAGGAGGAATAGACGGTGTTATTATTATTATTATA
GCTATTATCAAAAAAAATAATTAATGTATTATACGGATAAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11176g_CDS-001

Protein length: 1405 aa.
Product: Sulfite reductase beta subunit, putative

>YALI0D11176g_CDS-001 MPSAENLNGGLQQAVLHTASNAADQTFEVVRKLTPEASTIQIRESADPLAHIVNSPAAAD
SLLAVVASSHVLVKGLAHLSAFKNRAVVFHVETGSDYNDIAAIRHSQYVMLQSFGLEDVQ
EVAIKAYEVSKATGQPVIHFYAPVEGEVSLIPGNEIVSKVEKVETDSEKQLEQPIIAPQY
IGSSSAPSALIVFGSSTQLFIDNVKAHSQTGLVLVRQYRPWSVQAILNVLPKSVKTLGLA
EQIKSRTTAWSPLVLDYVADIHASGIDRDSAPKPVAFHLGQVTEATVNHVFAAISSNLTS
ASPVQNLTVGSGVTPNETKEEVKAEALTLETAYTKILHELFKEVNIINASDKKDAGLTSP
EYGYGAYLAYQEKRKELSERVRTAIRKNELGEELHKLLTMWAINREVDVTDIISKLEAKG
AKDLLELKEYFENKSSWLIGSDAWSHDLGNSGVHHVVSSGENLNMLIIDSTPYDTAQSKL
PSLRKKDIGLYAMGFGNVYVASTAVYASYTQVLQSLIEAAAFEGPSVVLAYLPYHSESDD
PVSILKETKRAVDSGYWPLYRYDPSLEAKGQEPFQLESSRIRQDLQKFLDRENKLTMLSK
KDPVLARNLAQGYGSGLRELQQRKAKDAYLQLLDGLSGAPITILFASDGGVAENVAKRLG
RRAKGRGLKPLVMAMDDFPLEDLSSETNVVFITATAGQGEFPQNGRNFWEGLKGATDVDL
TNTRVSVFALGDSLYWPRKADKHYYNKPGKDLHAKLVLFGAQDLAPLGLGDDQDADGWST
GYNEWEPAVWTALGVDGIGAIDEPPPITNEDIKAASNYLRGTIAEGLKDESTGAISAHDQ
QLTKFHGIYMQDDRDIRDERKAAGLEPAYSFMARVRLPGCRATPEQWLKIDELSDSRGNG
TFKITTRATFQLHGVVKHDLKPAIRGMNAVLIDTVAACGDVNRNVVTAALPENAKVHDQV
VKLGTDISEHLLPMTTAYYEIWLEGADESDKQNIGAPEIFDKREGGPKKKPKKIQVGEST
LKDMEEIKDTEELYGELYLPRKFKINVAVPPYNDVDVYAHDIGLIAIVENDVIIGCNVLV
GGGMGVTHNNTKTYPRTGSNLGFMPYDKIVDTCEKVMLVQRDFGDRTNRKHARLKYTVDD
LGVDVFKGKVEEYLGYKFEDARDFEFKSNTDYFGWVKDERGLNHFTSFIENGRVEDTPEL
QFKTGLREIAKAMTGKAEFRLTGNQHVLISNITDEELPKIKDLLKKFKLDNINFSGLRLS
SAACVAFPTCGLAMAESERYLPVLITKLEAALEEYGLRHDSIVMRMTGCPNGCARPWLAE
VALVGKAYGAYNLMLGGGYQGQRLNKLYRSSLKEDEILDILKPLFKRWSLERNDGEHFGD
FLIRVGVIKETTAGKNFWEGVEEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG