YALI0D11088g

Overview

Description weakly similar to uniprot|Q07533 Saccharomyces cerevisiae YDL117w CYK3 similarity to hypothetical S. pombe protein, protein possibly involved in cytokinesis
Locus type CDS
Locus tag YALI0D11088g

Location

Species Yarrowia lipolytica Positions 1388154..1391315
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3162 (nuc.)
Previous locus YALI0D11066g Next locus YALI0D11110g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D11088g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D11088gYALI0D11088g_mRNA-001YALI0D11088g_CDS-001

Nucleotide sequence

 

>YALI0D11088g
ATGACCGACACCTTCACGGTTCCGTACCTGCCCTGCCAGGTCAAGGCCATCTACTCGTGG
TCGGGCGAGGAAGACAACGACCTGGGCTTCATTGAAGGAGACATCATTGACGTCCTCAAC
ACGGGAGACGGAAACTGGTGGACTGGCAAACTACGACGAAACAACGTCACTGGAGTGTTC
CCTCGCAACTTTGTGGTTCTGGACGAGCCCAAGGGCGGCCGACGACCCCACCAGCCGCCT
CAGAAACGGTACACTCTGTGTGACGGAGACGACAGCTACAACGGAGGATACAGCTCAGCT
GACGCTTCTCAGGTGTCTCTGGAGCTGACGAGGTCTCCCTCGACTGAAGTGTCTGCTCTG
GACATTGCTAAGCCCGTCAATGGCGGTTACAAGTCTTTGGATCCCGCTCAATCTTCGCCA
CAGTCTTTTGACCCACTTGCTAAGCTAAGTATGCATCTTCAGAGTATTGATCTGGGACAT
GATCCACTGTACCCTCCTGTTCCTCCTCATGGAGTGAAGCAAACCTCCAACACACGCAGC
GGCAATCAGTCTACAAACTCACACAATGCCACCTACGACAAATACTCATCTCTGTCTAAC
CACAAAAGAACCAACTCGGATGATGGTAACTTTTCTGGCGACTTTTCCGGAGACTACTCT
GGGGATCTGGTCAACCACAAGTTTGACAGAGACATTACTCCACGACACAATGGTCTCGAC
CGGACGCCATCGCCGCTCAGAAACGCCATGGACGACGTTCTGCTGAGTCTAGATGGTATG
AAACAAGGTGCTAGAGCACAACAAGACTACAGAGATTTCACACCTACCAAAGACAGACCA
TACGGGGCTGTCCATACGCCAATGGCGTACCGACCTGAGGCAAGGAGACAGTTGTCGTAC
CACGAGAAACGGTCCTCTTGGATCCAAAGTGCAGGCCAGAAGACTTTTCATATGGGCGAC
AATGAGAGTGCGGCTTCTTCAGACGACGAAGAAGATGTTCCATTTTCTCCCGACTCTTAT
GGCAAGCTTCCATTTTCGCCTGACTCGTACAGTGGGGGTTCTGCTGGAGTCCATCGAGCA
GACACTGTCAACTCGTACTCCTCGGAGATGACAAAAATGTCTGGGGTTTCGGGCTGTTCT
TTGCCGACCACTGTGTCTGATTTCAGTGCCACTTCTGCTGCTGACTTCCACATGCGCCAG
GGTCTCCACGAAGTGACCACAAAGTACATGGCTGACATTGAGTCCACTATGAAGACAGAT
TCCGCTGACTACGATGCCACGGAGGTGCCCGTGGCTCTGCCCAACCAGTTGGGTCCCGAG
AAGTCGCTCAAGATGCGAAAGTCCACGGGCTTCCTCAAGAAGTTCATTAAGAAGGTGACC
AACACAGTTCCTTCTTCAGGCTCGACTCCAAACATGTACAAGACAGCATTTGTGGAGTCT
TCGCCGTCTTCACGAGCTTCGCCCAAACGAACCGCTTCCATCAAGTCCAACAAGTCCAGT
CGCTCGCTCCGGTCCATCAAGTCTCTGTCGGCAATCTCCTTCTCCTCCAGCAACTTCAGC
TCCGCAGCTCTCATGAGCGAACCAAGCAAGACCAGCAATGTCAAGCAGTCGGCTGTGGAT
CCCAAACAGTGGATTGAGATTCGCCAGAATGTCCACAGGGCCAACACCGTTACCGCTGTG
GAACGTAAGGAGCGGCAGAAGAAACTGGCTCTGGAGGGTATCAGATGCATTGAGCCGCTC
AAGAAAACAGCGCAACTCATCTCGCCACGGAAGATTGAAACTGATCTCAGTCACGTGGAC
CGCTACGTGCGAACACAAATGTCTTCGCTTGCGTCGTCGTCCACTCCCCACCTGCTCATG
TCCAGACATGTCATGCCACAGTTCCAATATGAGATTGAACGGCTCCGAGCTGTCTTCATG
TTCTGTTCCGAGAAGCTCAAGTGGACTGGAGACCATGCCGAGAGATATGACATTGACTTA
CAAGCGACGATGCAAAGCCGAAAGGCCACCACTCAGGAAGTGGCCATGTTGGTGTCGCAT
ATGTGTGCTGCCTTGGGAGTGCACTGCCAGGTTATCCCAGGTATGCTCAAGGCCCCTGGA
GGGGTGTTTGACTCGCGATCCACACTAACACCAAACCACTTCTGGAATGCGGTGCTTGTG
GATGACCAATGGCGAGTCATGGACTGCACTCTTGCCAACCCTTCGTTCCCGCTGCGATAT
CAGTACTCTGCAGCCAGTGATCGAGCCTGCGACGACTTTTACTTCCTCGCTTCCCCTGCG
GAGGCCATCTACACGCACATCCCCACCAAGGAGACGTACCAGCATCTTGAGCCCGGCCCT
CTGGATCTCATGACCGCTCTTGCACTGCCTGTGCTGTGTCCTAAGTACTGGGACACGCGG
GTCAAGCTCACCAACTACGACACCACTCTGATGCGGCTCAAGAACCTCGAGGTCGGAGAA
GTGACCTTCACTGTGTCTCCAGACATGGAGATCTTTGCGGACGTGCAACCGGGCTCTTTT
GCTGCCCATGGACACTCGGCCATGCTTGAATACGCAGCCTCCAGAACCATCCAAAAGGTG
CCCACCTTGTGCCAGGTGTACTGGGAGTTTGGCAAGCGAATCTACCGGGTCAAGGCCGTT
CTTCCTCCTGGTTTCGCACAGGGACTGGTCAACGTCTATTGTGGTCCCAAGGGCAAGAAC
TCATCGCACAGAAAGAACCACCATCCTGTCGTGGCAGCCTTCCCCATCACACACAGTGGA
ACCACTCAGCAGTTTGAGTTTGTCATCAGACATCCCACTCCTCACTGCAAGCTGCAGGAT
CTCTATGTGGTCCAACCCCAGTGCTACAAACTCACAGTCGGCAACATCTACCACTTTGCC
ATCAAGCAGCACCCCAGCTCGGGCATCAACTCTGGCTCCGGCTTTGCCCGCACCAAAATC
GCCATTCAGCCTCCTTCGGGCAAAATCACAAAACTCGTGCTCAAGGAAGACGACTCCACC
ACCACCCACGGGCTCTGGGAGCTCAGTGTCAAGTGTACCGAAAGCGGCCCCTGGCGGGCG
CTGGTGCTCACTGACAGTGGCAGTGCATGGAGCGTCTTTGCTGAATGGCTCTGTAGCTAA
CATTATTTATATAGATTGATTAATTGTACAACGTGTTTGTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D11088g_CDS-001

Protein length: 1040 aa.
Product: Conserved hypothetical protein

>YALI0D11088g_CDS-001 MTDTFTVPYLPCQVKAIYSWSGEEDNDLGFIEGDIIDVLNTGDGNWWTGKLRRNNVTGVF
PRNFVVLDEPKGGRRPHQPPQKRYTLCDGDDSYNGGYSSADASQVSLELTRSPSTEVSAL
DIAKPVNGGYKSLDPAQSSPQSFDPLAKLSMHLQSIDLGHDPLYPPVPPHGVKQTSNTRS
GNQSTNSHNATYDKYSSLSNHKRTNSDDGNFSGDFSGDYSGDLVNHKFDRDITPRHNGLD
RTPSPLRNAMDDVLLSLDGMKQGARAQQDYRDFTPTKDRPYGAVHTPMAYRPEARRQLSY
HEKRSSWIQSAGQKTFHMGDNESAASSDDEEDVPFSPDSYGKLPFSPDSYSGGSAGVHRA
DTVNSYSSEMTKMSGVSGCSLPTTVSDFSATSAADFHMRQGLHEVTTKYMADIESTMKTD
SADYDATEVPVALPNQLGPEKSLKMRKSTGFLKKFIKKVTNTVPSSGSTPNMYKTAFVES
SPSSRASPKRTASIKSNKSSRSLRSIKSLSAISFSSSNFSSAALMSEPSKTSNVKQSAVD
PKQWIEIRQNVHRANTVTAVERKERQKKLALEGIRCIEPLKKTAQLISPRKIETDLSHVD
RYVRTQMSSLASSSTPHLLMSRHVMPQFQYEIERLRAVFMFCSEKLKWTGDHAERYDIDL
QATMQSRKATTQEVAMLVSHMCAALGVHCQVIPGMLKAPGGVFDSRSTLTPNHFWNAVLV
DDQWRVMDCTLANPSFPLRYQYSAASDRACDDFYFLASPAEAIYTHIPTKETYQHLEPGP
LDLMTALALPVLCPKYWDTRVKLTNYDTTLMRLKNLEVGEVTFTVSPDMEIFADVQPGSF
AAHGHSAMLEYAASRTIQKVPTLCQVYWEFGKRIYRVKAVLPPGFAQGLVNVYCGPKGKN
SSHRKNHHPVVAAFPITHSGTTQQFEFVIRHPTPHCKLQDLYVVQPQCYKLTVGNIYHFA
IKQHPSSGINSGSGFARTKIAIQPPSGKITKLVLKEDDSTTTHGLWELSVKCTESGPWRA
LVLTDSGSAWSVFAEWLCS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG