YALI0D10901g

Overview

Description similar to uniprot|P21374 Saccharomyces cerevisiae YJR050w UTR3 pre-mRNA splicing factor
Locus type CDS
Locus tag YALI0D10901g

Location

Species Yarrowia lipolytica Positions 1366822..1367607
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 786 (nuc.)
Previous locus YALI0D10879g Next locus YALI0D10923g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10901g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10901gYALI0D10901g_mRNA-001YALI0D10901g_CDS-001

Nucleotide sequence

 

>YALI0D10901g
ATGTCGCGGAACTCGGAAAAGCAGGGCAGCATGTTGCATCGGTTCCAGCAGCAACAAGCC
AATGCTGCTGGCTTGCTGGACGTTGGCCGCACAGTTCGCCCAACATACATCTCTGGAGTG
GAGAGTCTCCCCCAGGCTGAGAAATGGAGATCTCAGGTCATGAAGGAGATTTCCAGAAAG
GTGACCAAGATCCAGGACCCGGCGCTGTCTGACTTCCAGCTCAGAGACCTCAATGACGAA
ATCAACAAGCTGATGAGCGAACGGCATCGATGGGACCTGCAGATCCGAAGTCTAGGAGGG
CCCAATTACGCCTCGTTTGGAGGAAAGAAGCGAGGTTACCAATACTACGGACGAGCTAGA
GAGCTTCCAGGCGTGTCCGAAATGCTGCAGTCGCAAAAGAAGGACGATACCAAGAAATCC
GGTGACTTTTACATCCCTCCAAAGAACCTCAATATGGTGTACTTTGGCTACGCCGATGAT
AATGTCACGGGGCTGATGGAGTTTGAGAAACAGAGAGAATCTGAATTACAGGATATGCTT
GCTGGAAAACCAGACGAAGATAGTGGTTTCGTTGTCGGAGATATCACTGTTCCCGAGGAG
GGAGATTTGGAAGCACGATTACTGGAGGAAAGGAAACGACGTGTGCAGGCTCTGCTAGAC
TAGACTGATAGCGCAAGATCTGTCGCTATCGCTGTACATCCTGTATCCCGCGCTCTGGGG
ACGTTCGTGTTATACATACTGTACATTGTAAATTATATAGCCAATATTTATTACCATAAC
ATTAGT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D10901g_CDS-001

Protein length: 221 aa.
Product: Member of the NineTeen Complex (NTC), putative

>YALI0D10901g_CDS-001 MSRNSEKQGSMLHRFQQQQANAAGLLDVGRTVRPTYISGVESLPQAEKWRSQVMKEISRK
VTKIQDPALSDFQLRDLNDEINKLMSERHRWDLQIRSLGGPNYASFGGKKRGYQYYGRAR
ELPGVSEMLQSQKKDDTKKSGDFYIPPKNLNMVYFGYADDNVTGLMEFEKQRESELQDML
AGKPDEDSGFVVGDITVPEEGDLEARLLEERKRRVQALLD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG