YALI0D10857g

Overview

Description some similarities with uniprot|O60140 Schizosaccharomyces pombe Hypothetical 49.1 kDa protein
Locus type CDS
Locus tag YALI0D10857g

Location

Species Yarrowia lipolytica Positions 1357090..1359556
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2467 (nuc.)
Previous locus YALI0D10835g Next locus YALI0D10879g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10857g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10857gYALI0D10857g_mRNA-001YALI0D10857g_CDS-001

Nucleotide sequence

 

>YALI0D10857g
ATGGCTATCAGTGTATCTGAATCCACATCTTCGGCACAAACGCCCGCTCCCGCGCCGGCA
CAGACCGCGAGACAAGCTTCTCCCGCTCAAGCAGCTGGATCAAACTCCTCTGGTTCCTCG
CAAACTGCTTCAGCACCTTCTTCGAGATCACGGCAGCGGCGGCGTCGTCCCAATAGAAAT
GGTGGACAGCAGAACCGGCGCAACCAGAACCATAACAGTCAGAACAACAACCAGGAAACG
GGTTCCGAGACGCCCGCGACATCGGACCAGCCTTCGGACCAGACTCAGACGCAGGGACTG
AGTCAGGGACAAAACCAGAACCGCTCCCAGAGAGTGACTCAGGCGGACCCCAGTCGTCGA
GTTGCTCGGCCCAAACCAAACCAGGAGAACCAGCGCATGAACGAGATCAATCAGGTTAAG
AGACGGTGGAAGTCTGTCACGGAACAGGTCCCCGAGGACGCTGCCCGAGATGCCGGGGCT
ACTACTCTCACATTCGACATGGCTCCCTCAGATCCCGATTTTCCGTTCGAAATTTCGTTT
CTCAAGGTCAAGATGGTTGTGCCCAAGAACTATCCCAAGGATGTGCCTTCTATCGAGGTA
CAGAACAAGGATATCCCCAAGGGCTTTGCCCTGAACGTGGATGCTGGTTTCTACTCGATC
GCTAAGGAGAATCTTGGCCGAACTTCCCTCCTGCGAATCATGTACCAGCTGGACAATAGA
TTGGAGGAGTTCCTCAAGATGGACAAGGCCAAGACTATCAAGATTGTCAAGTACGCCCAA
AAGAAGCCTAGTCCCGAGCCCGCCGCTCCAAAACTCAAGGCTTTCAACCCATCTGCCAGC
GCCTTTGTGCCCGCTGCAAAGTCTGCTGCTCCTGCTGCTCCTGCTGCTCAGATCTTTGTG
CCTCCCAAGGTGGCTGCCGAGCAAAAGAAACAGGTGGAGCTTTTGCGGGCACGCATCAGG
GACCTTCCTCTGCACAAGGAATCTGCCAGTGGCTACTACTACTCTCTGAACCGTCTGGAG
ATTTACCAGTCTTTCTCTACTCCTGAGATCTTCCAGAACAAGCCTGTTCTTAAGGCCCGG
CTTTTTGTTCCCAAACGGTTCCCTGAGAACCGAGACGTTCGAATCGAGCTTCTCGAAGTC
CCTCAGAAGATCGGACGTGTGGTGGAACAAAATTTTGCGCGGTTTGCAAAGTACACCACT
GAAAAGTGGACTCTCACAGCTCTCGTCAATTATTTTGTGACCAAGTTCACCAAACTTTGC
GACGACATCGACGACGTCAAGGAGACCCATGTAGTTAGGGACAAGGGAAAGGAGAAGGAG
TTGGTTGAGCCAGAGACTGACGGTGCTAGCATGGCTACGGAAGGAGGTGAGGTTTCCGAG
GTGACTGAGGGCGTGGAAAAGGTGTCTTTGGACGAGAACAAGGACGAGAACAAGAAGAAG
GAGGAAGAGACCGATACCGAAGGCGTTGCTGAGGACACTACTGAAGAAGACACAAAGGTA
ACCTCTTACACGGATGATGTGCCTACTCTGGAGCCTCGAGGAACCGAGATCAAGCTGTCT
GGTATCGAGCTGGTCAACATTGGTGTTCTTGAGTGTTCCACTCTCAACCTGACCGTGAAT
TGCACTCGGTGCAAGACCGCCAATGATATTCAGGGTATTGTTGCTGGTCCCTATGGCCGC
GACGGCAAGGCTGTTGGTGTGTCTTGTTCTCAGTGCAACCAGACTTTAGTCGTTGCTTTC
CGAAAGAACCTGATCCACAGCTTCAACCACTGTGCCGGCTATCTTGATCTTGAGGGCTGT
GTTCCCTTTGACATGATGCCTTCTCTATTTATTCCTACTTGCATGAACTGTTCTGAGTCG
TTCCCGCAACCGCTCAAGGGTCTCCAGAGCGGCTTTTCGGCCACTGTCAACTGTCGGGTG
TGCCATATTCGCATGACGGTTCGAATCCCCCAGTGCACATTTGAGGTGATTGACGATTAT
GCAATCCCTGCCGACCGTCTGAAGAAGGTGCATGTTCGCAAGCGTGCCAAGGAGAATCTG
GGGATTAAGATTGGCGAGCCTCTTCCTAACGAGGGCACCTGTCGCCACTACAAAAAGTCG
CACCGATGGCTCCGGTTTTCGTGCTGTGGCAAGGTATTCCCCTGTGACAAGTGCCACGAT
GACATAAGCATGCATGTTGCCGAACATGCCAACCGAATGCTTTGTGGAGCCTGCAGTCGA
GAGCAGACCATTACCAAGGAGTGTGATTCGTGTGGATACTCCTATGTTCCTCGTCACAGT
GCCCATTGGGAAGGTGGTAAGGGCATGCGGGACCAGACCCGAATGTCCAAGAAGGACAGT
CGAAAGTACAAGCGACTGTAGCGATAGTCATTTGCATTCTACGTACATTAGTATTGTATG
TACATTAGTATTTAATTCTCAGACTTAGTACCGCTACTTGTAGCTACTGCATTAGTATTT
ATCATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10857g_CDS-001

Protein length: 787 aa.
Product: Conserved hypothetical protein

>YALI0D10857g_CDS-001 MAISVSESTSSAQTPAPAPAQTARQASPAQAAGSNSSGSSQTASAPSSRSRQRRRRPNRN
GGQQNRRNQNHNSQNNNQETGSETPATSDQPSDQTQTQGLSQGQNQNRSQRVTQADPSRR
VARPKPNQENQRMNEINQVKRRWKSVTEQVPEDAARDAGATTLTFDMAPSDPDFPFEISF
LKVKMVVPKNYPKDVPSIEVQNKDIPKGFALNVDAGFYSIAKENLGRTSLLRIMYQLDNR
LEEFLKMDKAKTIKIVKYAQKKPSPEPAAPKLKAFNPSASAFVPAAKSAAPAAPAAQIFV
PPKVAAEQKKQVELLRARIRDLPLHKESASGYYYSLNRLEIYQSFSTPEIFQNKPVLKAR
LFVPKRFPENRDVRIELLEVPQKIGRVVEQNFARFAKYTTEKWTLTALVNYFVTKFTKLC
DDIDDVKETHVVRDKGKEKELVEPETDGASMATEGGEVSEVTEGVEKVSLDENKDENKKK
EEETDTEGVAEDTTEEDTKVTSYTDDVPTLEPRGTEIKLSGIELVNIGVLECSTLNLTVN
CTRCKTANDIQGIVAGPYGRDGKAVGVSCSQCNQTLVVAFRKNLIHSFNHCAGYLDLEGC
VPFDMMPSLFIPTCMNCSESFPQPLKGLQSGFSATVNCRVCHIRMTVRIPQCTFEVIDDY
AIPADRLKKVHVRKRAKENLGIKIGEPLPNEGTCRHYKKSHRWLRFSCCGKVFPCDKCHD
DISMHVAEHANRMLCGACSREQTITKECDSCGYSYVPRHSAHWEGGKGMRDQTRMSKKDS
RKYKRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG