YALI0D10615g

Overview

Description weakly similar to uniprot|W7R3L1 Saccharomyces cerevisiae P283 SLX8, protein with a RING-finger- containing E3 ubiquitin ligase domain
Locus type CDS
Locus tag YALI0D10615g

Location

Species Yarrowia lipolytica Positions 1324854..1325618
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 765 (nuc.)
Previous locus YALI0D10593g Next locus YALI0D10627r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10615g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10615gYALI0D10615g_mRNA-001YALI0D10615g_CDS-001

Nucleotide sequence

 

>YALI0D10615g
ATGAGTAGTACTATTCTTTTTTCATCCCGCTTTACCCGCCGCCTTAGCCTCCTAACAATA
TCTCACACTCCGAACCAAGTAAGCCCAGTGCTTAAACCTAAACAGAGTCCGTTTTTTAGT
CCAACAAAACACCATACCAAACTGCAAACAGTACACAGGCAGCAAGTCCAGCGACAGGCA
ATGTCCGGGACACCGCTTTCTGTCCACAGCTCTGCATCGACGCCCGAATCGCGCATGCTC
ACCATTAACGACACAGACACAGACAACTCGTCCCAGCCACTGTACATTGACTCCGGAGAC
GAAGAAACGCACAATGTGATTGATCTGGATGCCTCCGACGCCTCCGATTACGACAGCAAC
GACGACGACGGGCTCGATCTGTCGGCTCCTCCGCCAGATCAACACAGCAAGTTGCGCGAG
GTCAAGTGTCCGATTTGCCTCGAGCCGCCAGATCGGCTTTGTGTCACGGAATGCGGCCAT
CTCTACTGCGGGGACTGCGTGTTCAAGGCTCTTTCTTCGGGGGTTCGGGCCTCTGATTCG
GTGGGGGAGTGCAGTATTTGCCGCAAGTCTGTCGTCTACAAGAACGTTGTGTTTCTAGAG
ACCAGAATGGGCCCTCTACTCAAGGACGACGACGACGAGTACGAAACGGACGACTCCATC
GAAGACGACCGCAATGTCAAGGTGCAAAAGATGCACGAATCACTAACCTATGATCTGGAC
GAGGTGGACACTCTGGATCTGACTCCGTCCTTGCCGGACGCGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10615g_CDS-001

Protein length: 255 aa.
Product: Conserved hypothetical protein

>YALI0D10615g_CDS-001 MSSTILFSSRFTRRLSLLTISHTPNQVSPVLKPKQSPFFSPTKHHTKLQTVHRQQVQRQA
MSGTPLSVHSSASTPESRMLTINDTDTDNSSQPLYIDSGDEETHNVIDLDASDASDYDSN
DDDGLDLSAPPPDQHSKLREVKCPICLEPPDRLCVTECGHLYCGDCVFKALSSGVRASDS
VGECSICRKSVVYKNVVFLETRMGPLLKDDDDEYETDDSIEDDRNVKVQKMHESLTYDLD
EVDTLDLTPSLPDA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG