YALI0D10461g

Overview

Description weakly similar to uniprot|C4R8R0 Komagataella pastoris hypothetical protein
Locus type CDS
Locus tag YALI0D10461g

Location

Species Yarrowia lipolytica Positions 1310549..1311264
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 716 (nuc.)
Previous locus YALI0D10439r Next locus YALI0D10483g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10461g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10461gYALI0D10461g_mRNA-001YALI0D10461g_CDS-001

Nucleotide sequence

 

>YALI0D10461g
ATGCATCCCATAGTGCCTCAACCTGGCTCTGTGGCGGACAGTCAACGCAACACAAATATG
GTGAAGCCGCGCTCCAAGGTGGAAAAGCCCTCCAGCAAGAAAAAAACGTCCGGCAAGGAT
AAATCCAAATCCGAGGAGGTGATGAAGGTGGAGCAACATGAGGGAGATGAGACGGAAGAA
CAGGTTGAAGAGAAGGAGAAATCCGAGGAGGTGGAGAAGTCTCCACAAGTGAACGTCAAA
GAAGAAGACACTCCACAGGAAGCTCTCAACTCACCCGAGGTGTCTCAATCTTCGGAACTG
GCCGAAAACACAGACTACATTGCTCTGACTTCTGCGCTGTCCATGCTTACGAGACAGCAA
GAGACGAGCAAAAGAGACTTGGTCAAACTGTCGCAAATGAGACAGCAGGCGGTGGAGCAA
CCCGAGCAGTTTTTGGAAAAGGTCAAGAGCGGACAAGTGTCTTTCCCCAAGGCTCTCTAT
GTCACCATGGTTCCTTCAATCGACTGGAACCAGTACGACTTTGATAACCGAGAGTTGGAC
GCTGTTATCGGGCGTCAGAGAAAGGAGTCAGAAAAGGGTGTTGTTGAAGAGGTTCCGTTG
TTTAACCAGTAGTGGACTGTACACCAAGAGGCTACAGTACTCATCAAACAACAATTTATG
ACACAGTACCTCCAGTGTCTTGGTATTTATAGGTAAAATGTATTATTATTGTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10461g_CDS-001

Protein length: 204 aa.
Product: Conserved hypothetical protein

>YALI0D10461g_CDS-001 MHPIVPQPGSVADSQRNTNMVKPRSKVEKPSSKKKTSGKDKSKSEEVMKVEQHEGDETEE
QVEEKEKSEEVEKSPQVNVKEEDTPQEALNSPEVSQSSELAENTDYIALTSALSMLTRQQ
ETSKRDLVKLSQMRQQAVEQPEQFLEKVKSGQVSFPKALYVTMVPSIDWNQYDFDNRELD
AVIGRQRKESEKGVVEEVPLFNQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG