YALI0D10175g

Overview

Description some similarities with uniprot|Q2H4H4 Chaetomium globosum hypothetical protein CHGG_06441
Locus type CDS
Locus tag YALI0D10175g

Location

Species Yarrowia lipolytica Positions 1287767..1288391
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 625 (nuc.)
Previous locus YALI0D10153g Next locus YALI0D10197r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D10175g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D10175gYALI0D10175g_mRNA-001YALI0D10175g_CDS-001

Nucleotide sequence

 

>YALI0D10175g
ATGTCGCTACTAACAGCCCAACCCACCACATTCTGTTCGGAATGCCCACACTGCGAGTCT
GCATACACACAACAGTCGGCGCAGCCGGCAGGCCGCCACGAAATGAGTGGGGAAACATGT
TCCCTGTCCATTCGAAGCTTCGACGGAACGTCCAAACGATACTCCTTTTCGAGCAACGCG
ACGCTCCAGGATGTGCGAAAGGAGCTCAAGAAGAAGGCGCAGCTGCTCAACCAAAACTAC
GCCTTTGTGTCGCTCTTCCCCACCCGCAAACTCAAGGAGACGGTGCCGTTGAACGCCCTG
GGACTCTGCCCCTCCGCCTCTCTACTGCTCAAACGAATGCCTCCCAAGCTGGAACCCCAC
CAGGCAGAGAAGCCCAGCCTGTCGCGCGACCTCATCAACCACGAGCAGTCGCGCTGGACC
CTTTCTTTCATCTTTCTGTTTGTGTCTTCGTCCTACTTTTACACCCAGGACTCATGGTGG
CCCTTTATGACCATGTGGGCCGTGCTGGTGCTGGTATTCCGGGCCATTCGACAGAACCAT
CTGAATTCACAAACCTCCGCTCCCCAGGTCAGATAATCCCACAGAGCACATATTTATTTA
TACGCTATTTATTGTTACATTTCAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D10175g_CDS-001

Protein length: 192 aa.
Product: Conserved hypothetical protein

>YALI0D10175g_CDS-001 MSLLTAQPTTFCSECPHCESAYTQQSAQPAGRHEMSGETCSLSIRSFDGTSKRYSFSSNA
TLQDVRKELKKKAQLLNQNYAFVSLFPTRKLKETVPLNALGLCPSASLLLKRMPPKLEPH
QAEKPSLSRDLINHEQSRWTLSFIFLFVSSSYFYTQDSWWPFMTMWAVLVLVFRAIRQNH
LNSQTSAPQVR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG