YALI0D09845g

Overview

Description similar to uniprot|Q12432 Saccharomyces cerevisiae YPR023c EAF3 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex
Locus type CDS
Locus tag YALI0D09845g

Location

Species Yarrowia lipolytica Positions 1246739..1248059
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1321 (nuc.)
Previous locus YALI0D09823g Next locus YALI0D09867g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09845g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09845gYALI0D09845g_mRNA-001YALI0D09845g_CDS-001

Nucleotide sequence

 

>YALI0D09845g
ATGGTTCTAGCCACCAATTCGCGGTGCCTGGCGTACCATGGTCCGCTGCTCTACGAAGCA
AAGATCCTCATGTCTTACGACCCCTCCAAACGCGGCTCTAAGGCCAAGGTGGAGGACGGG
CTTCCGCCCACGGTTGAGATCGGAAACGTGGTCAACACTCACAAGCGCAAGCGGGGTCCT
CGCGCCTCTCTTCCTGCTGCGGGCGCAACGCCCGATGGAGACGACTCCAACGACAAAAAC
CGACACTTTAGTCCAAAGGAAGGGAAACCTGACGTGCCCGCAGATCTGGCCGACGAAAAC
GAGGACAAAATCTGCTACTACGTGCACTACAAGGGCTGGAAAAACACGTGGGACGAGTGG
GTCGGCGAGGAGCGGGTACTGGCTCTCAACGAGGACAACATCAAGCTACAGAAGGAGCTC
AAGGCTGCGGCTCTAGCAGCGGCCAAGAAGGGCAAGGATTTTGACGCCCTGGCTCCTCCC
GAGGCGCTCAGTGAAACGGCCTCTCCGGCACCAACCACAAAGCGCAAATCCATGGCATCA
AAGGACTCTCCTGCTGAGGGACCCCGTCCCGTGAAACGACGAGGGGGACTCGCTGCCCTG
GAGGACCTCGAGAAGGAAGACGACTATCTAAAACGCAAGGAAATTGCGCTTGTTGTGCCC
GACAAGCTCAAGGCCCAGCTGGTAGACGACTGGGAGTTTGTCACCAAGGACCACCAGCTT
GTCGGCTTGCCCCGGAAGGTGACGGTGGTGGACATTCTCAAGGAATTCAAAAAGGAGGCG
GAGGCCAAATATAGACCTGGCTCTGCCGACGCCGATATTCTCAACGAGGTGGTGTCGGGA
ATCAAGCTCTACTTTGATCGCTCGCTGGGCTCAATCTTGCTCTACAGATTCGAGCGAGAG
CAGTACCTACAAATCACCCAGAGCCCAGACCACTCCAACAAGACCATGAGCGAAGTCTAC
GGCGCGGAGCATCTGCTGCGGCTGTTTGTGTCGCTCCCGGGGCTCATTGCTATGACCAAC
ATGGATGCCCAAAGCGTGGCGGTGCTCAAGGAGCACTTGGAGGACTTTGTGCGGTTTCTG
TCGACCCACCAGAAAACGTACTTTTTGAAGGAGGCTTACACAAATGCTTCGCCCGCATAC
GAGGCTCTGTCCAAGGGTCTTTAGGGTTAGAAACGAAGAGCGAGGCAAAGAGTCGCGCAG
CGATTCCCTCCGAGCTGGCCTACCGACAACATCATCTGTCATAGGCCGTTGGTCGGTGGT
GATTAATCACGTTTGACCATATAGCTAGCTAACTACTCAATACATGTATAACAGTGGGTG
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09845g_CDS-001

Protein length: 388 aa.
Product: Component of the Rpd3S histone deacetylase complex, putative

>YALI0D09845g_CDS-001 MVLATNSRCLAYHGPLLYEAKILMSYDPSKRGSKAKVEDGLPPTVEIGNVVNTHKRKRGP
RASLPAAGATPDGDDSNDKNRHFSPKEGKPDVPADLADENEDKICYYVHYKGWKNTWDEW
VGEERVLALNEDNIKLQKELKAAALAAAKKGKDFDALAPPEALSETASPAPTTKRKSMAS
KDSPAEGPRPVKRRGGLAALEDLEKEDDYLKRKEIALVVPDKLKAQLVDDWEFVTKDHQL
VGLPRKVTVVDILKEFKKEAEAKYRPGSADADILNEVVSGIKLYFDRSLGSILLYRFERE
QYLQITQSPDHSNKTMSEVYGAEHLLRLFVSLPGLIAMTNMDAQSVAVLKEHLEDFVRFL
STHQKTYFLKEAYTNASPAYEALSKGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG