YALI0D09779g

Overview

Description some similarities with uniprot|Q06168 Saccharomyces cerevisiae YLR321C SFH1 Component of the RSC chromatin remodeling complex
Locus type CDS
Locus tag YALI0D09779g

Location

Species Yarrowia lipolytica Positions 1235290..1236677
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1388 (nuc.)
Previous locus YALI0D09757g Next locus YALI0D09790r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09779g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09779gYALI0D09779g_mRNA-001YALI0D09779g_CDS-001

Nucleotide sequence

 

>YALI0D09779g
ATGGGGGAAAAGCCGAATCGAATAGGTAGGGCTAATATCAGCTATATTAATCATGATCAC
ATTTTTCTTCCATCTTTTCAGCCCTCGTACCCGTCACGCCAACTTCACCCTCTGATATCC
AGTCAAAATAAAGTTCACTCGTCAATCGTGCACCTCCCAAAAGTCGCATCACCAAGTTCA
CCAGAAACACAGCAGCACAGTCAAGCACCATTATTCATCACACACATCATGTCAGGACTC
CCCCAGGCCCTGGCGAGCGGCTTTGCTGCACGTGTCCGAGAAGGTGGCACCACGCTATAC
ATCAACACAACGCCCATGTTGCGATCGGCGCGTCACAACACGGCGGTCAACTACGCCGAG
TTTGAGGAGGACTTTGATGCCAACGACTTTGAGGACGACGACGACGACGATCAGTCGCAG
AGGGAATCACGTGACGGATCAGAGGAGGCGGAAGGCGACGAGGATGGAACCAAGAAGGAG
GAGCAGGACAAGTTTGCCGGACTCAAGGCTCCTCTGGTGTCCAACGAGCCCAAGCGAGCT
GCTCCTCCCGTGCGGCCGGTCATGTACCCTCAGGAGGTTCTCGAAGAGCTGTCACAGGTC
AAGGAGCCTACCCTGATTCCAATTCGCGTGGCGGTCGAGAATATTGATGTGTTCCGAGTG
CAGGACTTCTTTCTGTGGGACGCCGACGAGAAGATTCTCACTCCCGAGCAGTTTGCAACC
CTGACGTGTGCAGATCTCGACGTTCCCATTGGATACTCGGCCCAGATGTCAGCCCAGATC
AAGAAGCAGCTTGCTGAATACACAGCCGCCCCCGCTCTGCCCAAAGACGTTGAAGTGCAT
GTCATTGTGGAGTTGGCGGTCACCGTGGACAAGATTGTCTACGAAGATAAATTCGAGTGG
GACCTGAGCGGCGAGTACGCGACTCCTCAGGAGTTTGCACGAACCGTGGTCCAGGATCTC
GGTCTGGGTCAGGAGTTCTACCCAGCCATCACCTACCAGCTATACGAGACTCTGGGCAAA
CTACAAAAGGCTTGGTTGGAGCGAAGTATTCCTCTGGACGTCGACAACCGGGCCGCTTTT
GGCCTTGAGGCTGGCCTTCGTGTCGACCAGGACAATCTGGGAGAGTCGTGGGTTCCCAGA
GTGGAGGAGATGACGCCCGAGGAGATGCAAAAGCGAGAGATGGAGCGAGACCGATCGTCG
CGACGTCTCAAGCGAGAAAGCGCACGAATGGCCGAGGTGCCTTATGTCGATCTCGACAGC
TTGTATTCTAGAAAGCGACGACGACGATTTGATGAGGACAGCAGGAGCGGCAGTCCCATG
TGGTAGTGGCCCTACTTGCTGCTGGGATTGGTTATGTACAATAATATTAACAAGGTGATT
GGATTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09779g_CDS-001

Protein length: 442 aa.
Product: Conserved hypothetical protein

>YALI0D09779g_CDS-001 MGEKPNRIGRANISYINHDHIFLPSFQPSYPSRQLHPLISSQNKVHSSIVHLPKVASPSS
PETQQHSQAPLFITHIMSGLPQALASGFAARVREGGTTLYINTTPMLRSARHNTAVNYAE
FEEDFDANDFEDDDDDDQSQRESRDGSEEAEGDEDGTKKEEQDKFAGLKAPLVSNEPKRA
APPVRPVMYPQEVLEELSQVKEPTLIPIRVAVENIDVFRVQDFFLWDADEKILTPEQFAT
LTCADLDVPIGYSAQMSAQIKKQLAEYTAAPALPKDVEVHVIVELAVTVDKIVYEDKFEW
DLSGEYATPQEFARTVVQDLGLGQEFYPAITYQLYETLGKLQKAWLERSIPLDVDNRAAF
GLEAGLRVDQDNLGESWVPRVEEMTPEEMQKREMERDRSSRRLKRESARMAEVPYVDLDS
LYSRKRRRRFDEDSRSGSPMW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG