YALI0D09251g

Overview

Description similar to uniprot|P25582 Saccharomyces cerevisiae YCL054w SPB1 required for ribosome synthesis, putative methylase
Locus type CDS
Locus tag YALI0D09251g

Location

Species Yarrowia lipolytica Positions 1169381..1171969
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2589 (nuc.)
Previous locus YALI0D09229g Next locus YALI0D09273g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09251g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09251gYALI0D09251g_mRNA-001YALI0D09251g_CDS-001

Nucleotide sequence

 

>YALI0D09251g
ATGGGTAAAATTCAAAAGAAACACGGAAAAGGTCGATTGGATCACTACTATCGATTGGCC
AAGGAGAAGGGCTACCGAGCGCGATCGTCGTTCAAAATCATCCAGATCAACCAGAAGTAC
GGCAAGTTTTTAGAAAAGTCCAAGGTGGTGATTGATCTGTGTGCTGCTCCTGGCTCGTGG
TGTCAGGTGGCGTCGCAGCTCTGTCCCGTTAACTCACTCATCATCGGCTGTGATATTGTT
CCCATCAAGCCGCTTCCTAACGTCATCACTTTCCAGTCAGATATCACCACTGACCACTGC
CGACAGCAGCTTCGACAATACATGAAAACGTGGAAGGCGGACACAGTCATGCACGATGGT
GCGCCCAACGTGGGTATGGCGTGGGCCCAGGATGCCTTCACGCAGTCCGAGCTGGTTCTG
CAATCGCTCAAGCTGGCGGTGGAGTTCCTCAACAAGGGCGGAACCTTTGTCACCAAGGTG
TTCCGATCCAAAGATTACAACAACCTCATGTGGGTGTTCCAGCAGTTTTTCGAGAAGGTG
GAGGCCACCAAACCGCCCTCTTCGCGAAACGTGTCCGCCGAGATTTTCGTCGTCTGTCTT
AAGTTCAAGGCTCCCAAGAAAATCGACCCCCGACTGCTGGACGCCAAGTACGTGTTCGAG
GAGGTGTCTCAGGGCAACAACAACAACGAGGCCAAGGTGTTCAACCCCGAGGTCAAGCGA
CGAAAGCGAGAGGGTTACGAGGAGGGCGAGTACCTGCAACACAAGCGTCTGTCCATTCTG
GACTTTATCACAGACTCTACTCCCATTGACAATCTGGGAGAGACCAACGAGATGACGTGG
ACCCCCAGATCCATCAAGGAGGGAGAGGTTGACGAGGAGGAAGAGAAGGAGAAGGATAAG
GAGGCTCGAGACGAGCGGGGAAACGTCCAGTATGTGCTTGACGACAAGGTTTACTCGGAC
GAAGACGCTCTCAAGATGGTGTCCAAGCTGCCCCAGACCACCCCAGAGCTGCTCGAGTGT
CTCAAGGATCTCAAGGTGCTAGGCCGAAAGGAGTTCCGGGCCATTCTCAAGTGGCGACTC
AGCGCACGTGACCTTCTGCAGATTGACAAGCCCGAGGCCGGAGTGGAGGTTGAGGAGGAG
GAGCTGGACGAGGACCAGCTGATTGACAAGGAGCTGTCTGAGCTTGGCGAGCGAGAAAAG
GCCCGTAAGAAGCGGGAAAGACGACGCCGAAACGAAATGAAACAGCGAGAAATCCAGCGA
ATGCAGATGAACATGACCACCCCCACAGAGCTCGGTATCGAGGCTGCCAAAATGGAGTCA
CTGTTCAACCTGAAACAGGCGGAGCGAACCGGCAAGCTGAGCGAGCTGCAGAAGGGTAAG
CGAAGCCATGTGAGCGAGACAGGCGACGAGCACGTGACTCTGGAAGAGGCCGAGCGGGTC
GACTACGGCTCCGACGACGAGGCCAACGGTCTGGAGGATGAGCTCGAGTCCATGTACACC
GAGTATCTGGAGAACAAGGCTGCTCGAACTGCCAAGAGTGTGGTTCAGCGAAAGAAAGCC
AATGTTGAGACCGAGGAGTGGTTTGGTATTTCCGACAAGAAGGATGGTGACGAGTCTGAC
GGCGAAATGTCTGCTGACGATGTTGACATGGCCACCATTGACGATGGCGAAGACGAGGAC
GACGGCAAGACTGCCCGAACTCTCAACAACGGCAACATGTTCTTTTCCAACCCGATTTTC
GACAATCTGGTGAACGCCGCCGTGGCCAAGACCGAGGCCAAACCCAAGGCTCTGGACCTG
CTGGAGCCCGGAGCCAAGGACCTGATTGAGCTGGAGAAGGCCAAGAAGCGCAAGTACGCC
AAGAAGAACGGTCTCGAATACTCCGACAGTGAAGACGAGGAGGACGATATCGTCATGGAG
ACCCAGAAGCAGGACGATTCTGACATTGAGTACGTGCATGGCGAGTCTGACTCCGACGAC
GAGCCCAACATTGATCTGGTGACCGACCAGGCCATGACCATGGCCCACCAGTTGGCCACC
GGCCAGACCAACAAACACAAGCTCCAGGACGATGGCTACAACCGGTACTCGTTCCGAGAC
CTGGACGGCCTGCCCCAGTGGTTCCAGGACGACGAAAACAAACATAACAAGCTCAACAAG
CCCATCACCAAGGAGGCTGTGGAGGCGCTTAAGCAGAAGATGAAGACTCTCAACGCCCGG
CCCATCAAGAAGGTGTTGGAGGCCAAGGGCCGAAAGAAGATGCGAGCTCTCCGACGACTG
GAGCAGATGAAGAAGAAGTCCGAGCTGATCAACGAAGATGGCGCGCGATCGGAGAAGGAG
AAGGCCGATGACATTTCCAAGCTCATGCGAAAGCTCGCCAAGCCCCAGAAGTCCAAGAAG
AAGACCGTCACCGTCGTCTACGCCGGAGGAAAGAACAAGGGTATTGCTGGCCGACCTAGA
GGAGTCACAGGAAAGTATAAGATGGTTGATGGAACCATGAAGAAGGAGCAGCGTGCTATT
CGACGAATTAAGAAGAAGATGGGCAAGAAATAGTCATATGGATAGAATTAATGGATGGTA
TTGTATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09251g_CDS-001

Protein length: 851 aa.
Product: AdoMet-dependent methyltransferase, putative

>YALI0D09251g_CDS-001 MGKIQKKHGKGRLDHYYRLAKEKGYRARSSFKIIQINQKYGKFLEKSKVVIDLCAAPGSW
CQVASQLCPVNSLIIGCDIVPIKPLPNVITFQSDITTDHCRQQLRQYMKTWKADTVMHDG
APNVGMAWAQDAFTQSELVLQSLKLAVEFLNKGGTFVTKVFRSKDYNNLMWVFQQFFEKV
EATKPPSSRNVSAEIFVVCLKFKAPKKIDPRLLDAKYVFEEVSQGNNNNEAKVFNPEVKR
RKREGYEEGEYLQHKRLSILDFITDSTPIDNLGETNEMTWTPRSIKEGEVDEEEEKEKDK
EARDERGNVQYVLDDKVYSDEDALKMVSKLPQTTPELLECLKDLKVLGRKEFRAILKWRL
SARDLLQIDKPEAGVEVEEEELDEDQLIDKELSELGEREKARKKRERRRRNEMKQREIQR
MQMNMTTPTELGIEAAKMESLFNLKQAERTGKLSELQKGKRSHVSETGDEHVTLEEAERV
DYGSDDEANGLEDELESMYTEYLENKAARTAKSVVQRKKANVETEEWFGISDKKDGDESD
GEMSADDVDMATIDDGEDEDDGKTARTLNNGNMFFSNPIFDNLVNAAVAKTEAKPKALDL
LEPGAKDLIELEKAKKRKYAKKNGLEYSDSEDEEDDIVMETQKQDDSDIEYVHGESDSDD
EPNIDLVTDQAMTMAHQLATGQTNKHKLQDDGYNRYSFRDLDGLPQWFQDDENKHNKLNK
PITKEAVEALKQKMKTLNARPIKKVLEAKGRKKMRALRRLEQMKKKSELINEDGARSEKE
KADDISKLMRKLAKPQKSKKKTVTVVYAGGKNKGIAGRPRGVTGKYKMVDGTMKKEQRAI
RRIKKKMGKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG