YALI0D09185g

Overview

Description some similarities with uniprot|P32323 Saccharomyces cerevisiae YNR044W (ohnolog of YCR089W) AGA1 a-agglutinin anchor subunit
Locus type CDS
Locus tag YALI0D09185g

Location

Species Yarrowia lipolytica Positions 1165034..1166282
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1249 (nuc.)
Previous locus YALI0D09163g Next locus YALI0D09207g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09185g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09185gYALI0D09185g_mRNA-001YALI0D09185g_CDS-001

Nucleotide sequence

 

>YALI0D09185g
ATGGCTCACATCCGCTTTGCTGTTCTACTACGAGTCTTGTTGCTGCTCTCTCTCTGCTCT
CTCTGCCACGCCCAGTTCAACCTCAAGGCGACAACTGAAGACCGCGGGGTTGGCAACAAG
ACCATCTGCATATCTGGAGGCAAAGGCGTCTTGCTTTTTCCGCCGGGAAATTCGTGTGTC
TTCACTTTTCGTGGCGGCATTCTCACGTTGTACTCCACCCACGGCATTCTCTTCAATGAG
GGCGAGCAGTTGGCCGAGTCGGACAACTTTCGGGGCTCCCAGATTTTGTTCAAGAACTCC
GTGCTTGATCCCCCGAACGACTGGCAGTTCACAGCGTGTCCAGAGTCCGACAACGGCTGG
TCGGTCTGGATGGACGCCAACTGCGACGGAGGAGTGACATTCGAAGCCATTCTTACTCCA
TTGGACGATGATGCATTGAGGGCCTTGGAGGAGAGTGCCAGTGAAACCACGGAAGCGAAC
GAATCTACCAAATCATCAACAGACGAACAACCATCGGAATCCACCTCTGAAGCCACCTCA
GAAGCCACTTCCGATTCCACCACTTCCGATGCAAACGCCTCCTCGGTATCCAAGTCTGCA
TCCACAAAAACAGTCACGGAGATTGTCACCATCACAGGGGAAGACAGCAGCCAAGTCTCC
GAGGTCACCACCACCAGAACAATCACCCAGGACCTACCAACTCCGGGGGTAGTCACAGTC
ACCCATCATGTTACGTCGTACGTGGTTGGAGGAGGCAATGCTGCCTCCAATGTAACGCCC
GGTGCTCAGAACGCAACTCCTGACGTCCCAAAAGGCTCTCCTCTATCAGCTGCTTCTCCT
GCTGACCCTACTTCTGACCCGGGCTCTGAATCCCCAGCTTGGAACGTAGGAGCTCTTCCT
TCAGGTGAGAACGGTGTCCATCGTACTCCGGACTCGGGAACCCAGGAAGGGGCACAATCA
GGAGCCCCAGAACACACAATCTGGTGGTCCCAGCCATCTTCTCCTTGGTGGACGCAACAA
ACTGGACCTTGGTGGACTCCCGAGAGTCTTAGTCATACTGCCTCTAACACTGCCTCTTCC
GGTACAAGCACCCCTTCTGCATCCGTTACAGCCCAGGAAAATGGCTCTGAGCGAACCCTA
AGCCCACTAAAACCCGTCCTAGAGACCCTCCTGGCTCTCCTGACGGTCCATATCACGTTC
TTTTACATCTATTAGATACATATAGTCAATAAATTGCATTTCGGACTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09185g_CDS-001

Protein length: 405 aa.
Product: Conserved hypothetical protein

>YALI0D09185g_CDS-001 MAHIRFAVLLRVLLLLSLCSLCHAQFNLKATTEDRGVGNKTICISGGKGVLLFPPGNSCV
FTFRGGILTLYSTHGILFNEGEQLAESDNFRGSQILFKNSVLDPPNDWQFTACPESDNGW
SVWMDANCDGGVTFEAILTPLDDDALRALEESASETTEANESTKSSTDEQPSESTSEATS
EATSDSTTSDANASSVSKSASTKTVTEIVTITGEDSSQVSEVTTTRTITQDLPTPGVVTV
THHVTSYVVGGGNAASNVTPGAQNATPDVPKGSPLSAASPADPTSDPGSESPAWNVGALP
SGENGVHRTPDSGTQEGAQSGAPEHTIWWSQPSSPWWTQQTGPWWTPESLSHTASNTASS
GTSTPSASVTAQENGSERTLSPLKPVLETLLALLTVHITFFYIY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG