YALI0D09119g

Overview

Description highly similar to uniprot|P33297 Saccharomyces cerevisiae YOR117w YTA1 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0D09119g

Location

Species Yarrowia lipolytica Positions 1159850..1161132
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1283 (nuc.)
Previous locus YALI0D09086g Next locus YALI0D09141g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09119g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09119gYALI0D09119g_mRNA-001YALI0D09119g_CDS-001

Nucleotide sequence

 

>YALI0D09119g
ATGGAAGACCTAGATTTCGACATTGCGTCCAACTCGACCCAAGACATTCTCAACCGCAAA
CGGCTTCTGGAGAATGAAATCAAAATCATGAAGTCCGAGTTCCAGCGGCTCAGCCACGAG
CGCAACACCATGAACGAGAAGATCAAGGACAACGCGGACAAGATTGAAAACAACAAGGTG
CTGCCGTATCTGGTTGGCAACGTGGTGGAGCTGCTGGACATGGAGGGCGAGGTGGCCGAG
GAGGGCGCCAATGTTGACGTGGAGGCGTCTCGAGTCGGCAAGTCTGCTGTCATCAAAACG
TCCACCCGACAAACGGTGTTTCTGCCGCTCGTGGGACTCGTCGATCCTGAAACTCTCAAG
CCCGGCGATCTGATTGGAGTCAACAAGGATTCGTTTCTGATTCTGGACACCCTGCCCGCA
GAGTACGACTCGCGAGTCAAGGCCATGGAGGTGGACGAAAAGCCCAAGGAAACCTACGCA
GACATTGGAGGTCTTGACAAGCAGGTGGAGGAGCTCGTGGAGGCCGTGGTACTGCCTCTC
AAGCAGGCTGAAAAGTTCAAGCAACTCGGCATCAAGCCCCCAAAGGGCGCTCTCATGTAC
GGCCCTCCCGGAACCGGAAAGACTCTGCTGGCCCGAGCCTGTGCCGCCCAATCTAACGCC
ACTTTCCTGAAGTTGGCTGCGCCCCAGCTGGTTCAGATGTTCATTGGTGACGGTGCCAAG
CTGGTGCGAGACGCCTTTGCTCTGGCCAAGGAGAAGGCCCCCACCATCATTTTCATCGAC
GAGCTGGATGCCATTGGAACGAAGCGATTCGACTCGGACAAGTCCGGAGACCGAGAGGTG
CAGAGAACCATGTTGGAGCTGCTCAACCAGCTGGACGGTTTCGGATCCGACGACCGAGTC
AAGGTCCTTGCCGCCACCAACCGAGTCGATGTGCTGGATCCCGCTCTGCTTCGATCCGGA
CGTCTTGACCGAAAGATTGAGTTCCCTCTGCCTTCCGAATCGGCACGAGCCGACATTCTG
CAGATCCACTCGCGAAAGATGACCTGCGACGACTCCATCAACTGGATGGAGCTGGCACGA
TCTACCGACGAGTTCAACGGAGCACAGCTCAAGGCTGTGACTGTGGAGGCGGGTATGATT
GCGCTTCGGTCTGGCAAGAACAAGATCACCCACGAGGACTTTGTTGAGGCCATCACCGAG
GTCCAGGCACGAAAGTCCAAGTCCGTGTCTTTCTATGCATAAGTATGTTATATACCTAAT
CTGATGAAATTGTACGAGTCGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09119g_CDS-001

Protein length: 414 aa.
Product: 26S proteasome regulatory subunit, putative

>YALI0D09119g_CDS-001 MEDLDFDIASNSTQDILNRKRLLENEIKIMKSEFQRLSHERNTMNEKIKDNADKIENNKV
LPYLVGNVVELLDMEGEVAEEGANVDVEASRVGKSAVIKTSTRQTVFLPLVGLVDPETLK
PGDLIGVNKDSFLILDTLPAEYDSRVKAMEVDEKPKETYADIGGLDKQVEELVEAVVLPL
KQAEKFKQLGIKPPKGALMYGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAK
LVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRV
KVLAATNRVDVLDPALLRSGRLDRKIEFPLPSESARADILQIHSRKMTCDDSINWMELAR
STDEFNGAQLKAVTVEAGMIALRSGKNKITHEDFVEAITEVQARKSKSVSFYA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG