YALI0D09020g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D09020g

Location

Species Yarrowia lipolytica Positions 1148319..1149614
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1296 (nuc.)
Previous locus YALI0D08998g Next locus YALI0D09042g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D09020g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D09020gYALI0D09020g_mRNA-001YALI0D09020g_CDS-001

Nucleotide sequence

 

>YALI0D09020g
ATGCCCCATCTGATCTATCACCACATGGGGCGAGTCACTCTATGTTCAACCCACCTTAAA
CCACTTAAAAAAACACAAGATAAAACAAAGTGTTTTCTTCCTCAGGATACCTTGATGTAC
AAAACTATTGCGCAAGAAAAGATACCAAAAAACAAAAGCAAGTCTTCCATGAGCTCCCCA
GCGCCCAGCAGCCCCCAGCCTCCCGCCACGGTGGACTGGAACGTGTCTGTCCCCGAAAAC
CCAGCTCTTTCTGCTAGACACAAAACATCGGGCCAGATTTTTCTTCAAAACTGGCTCCAG
ACCCAAGCTGAAGTGGATACCCCTCAACGATGCAACGAGCACCTACCCTGGAACAATGAG
CTCACTCCCGGCGACCCTCCGCGGCCCATCCGACGTCTGAGCTTTCCTAGCCTCACTCCT
CCTGGCGTATCATTCTCGGTGGGCTCGTCGGTGCCCTCCACTTCGAGCAACTCGATCGAG
ATTGCGCGTCGCAACCTCTCGAGCCAGATCCCTGGCGACTTTGAGGGCGATCTGTCAGGT
GAGCTGAATGATGACGGACAAGTTACCGACTTCAACGACTTCTCCTGCGTTGCTCAAGCG
CTCAAAGACAAAACCTTTTCGGGTCTCAGCAGCTTCGACAGCAGAGACAGGTACTTTGAC
GAGTCCGAACCGCTCAACTTTGGCAACCTGCCATTTCTCTCAGCGACCCACGCTCTGCTT
GACAAGAGTTTGAAGGGGAGAGTGAACCGTGATAGCTCAAATGGCCGAATTCCATCTATC
GACAACGAGAATTCCATTCTAGACGAATTCAGCGACGCATGCAGTAACGAAGACTCGTTA
TACGAGAGTCCTGACGAGAACCGCAGTTTTGGAGCTTACAGTTGTGATTCCGATGGACCC
ACTCCCGTCACTACATTCCCCAGAGATACCCACCCGGAGACCAGTTCTGGAGTCCACAGC
ATGACGGACATGGCTCTCGAGATGTTGAGCATTATCGCTAGTCTGGATACCATCACCATT
AACAAGCTGCATCGTCTGTTCAGTATCGCTGGTCAAGGTGACATGACTGTGGCTGTTGAG
CGGCTCCAGAAACATTTGCGGCCACGAAATGATCTGCCATCTCTGTTTGCCGGAAATACG
CAGAGTGTGTATTCTCAGCCCGTGGAGACGGCAATGGTGACTGAGGTGACCCCTTTGTTG
AGTACCGCCATACCGTCAGATACCCCCAAGGATGATTCCAAGTATTCCACCTGGCAGCGG
GTCAAGCGCCGAGTCTCGCATTCTTTTAAAATCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D09020g_CDS-001

Protein length: 432 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D09020g_CDS-001 MPHLIYHHMGRVTLCSTHLKPLKKTQDKTKCFLPQDTLMYKTIAQEKIPKNKSKSSMSSP
APSSPQPPATVDWNVSVPENPALSARHKTSGQIFLQNWLQTQAEVDTPQRCNEHLPWNNE
LTPGDPPRPIRRLSFPSLTPPGVSFSVGSSVPSTSSNSIEIARRNLSSQIPGDFEGDLSG
ELNDDGQVTDFNDFSCVAQALKDKTFSGLSSFDSRDRYFDESEPLNFGNLPFLSATHALL
DKSLKGRVNRDSSNGRIPSIDNENSILDEFSDACSNEDSLYESPDENRSFGAYSCDSDGP
TPVTTFPRDTHPETSSGVHSMTDMALEMLSIIASLDTITINKLHRLFSIAGQGDMTVAVE
RLQKHLRPRNDLPSLFAGNTQSVYSQPVETAMVTEVTPLLSTAIPSDTPKDDSKYSTWQR
VKRRVSHSFKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG