YALI0D08976g

Overview

Description similar to uniprot|Q12377 Saccharomyces cerevisiae YDL097c RPN6 subunit of the regulatory particle of the proteasome
Locus type CDS
Locus tag YALI0D08976g

Location

Species Yarrowia lipolytica Positions 1144038..1145342
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1305 (nuc.)
Previous locus YALI0D08954g Next locus YALI0D08998g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08976g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08976gYALI0D08976g_mRNA-001YALI0D08976g_CDS-001

Nucleotide sequence

 

>YALI0D08976g
ATGACTCTAGAAGAAACGCTGGCAAGCGCCAAGACCGCCGGAGACAAGGGCAACCTCGTG
GAGGCCGAGAAATTGTACCGGGAGATTCTCGATCAGAAGGCTGGAACCAACGAGAAATCG
ATCCAGATCCAAGAGTCGGCTCTCATCAATCTCGGCACTCTCTACGCCTCCAACAACAAG
CCCCAGGACCTCGCAGACCTCATCCATACTAGTCTGACGGTAATGAGCGGCTTTGCCAAG
TCCAAAACCGCCAAAATCATCAGAAACCTCATTGATCTTTTCGCCAAAGTGCCGTCTGAC
TGTATCGACCTGCAGATTGCCACCACACAAAAATGTATCGAATGGGCCGTTTCGGAGAAA
CGAAACTTTCTGCGACAAAGCCTGCAGACCCGGCTGGTGTCGCTGTTCCTGGAGAAGAAG
ACGTACTACGATGCGCTCAACCTCATCAATACCCTGCTCAAGGAGCTCAAGAAGCTCGAT
GACAAGATGGTGCTTGTGGAGGTGCAATTGCTGGAGGCCAAGGCGTACCACGCTCTCAGA
AACATCCCCAAGAGCCGAGCCTCTCTCACCTCTGCACGAACCTCCGCCAACGCCGTCTAC
TGCCCTCCTCTCACCCAGGCTGCTCTAGACACCATGTCTGGTATCCTGCAGGCAGACGAC
AAGGACTATAAGACAGCATTCAGTTATTTCTACGAGGCATTCGAGGGCTACGTGGGCCAG
GAAAACCCCAAGGCTGGCACTGTACTCAAGTACATGCTACTGTGCAAGATCATGTTGAAC
CTGGCCGATGACGTGGAGACCATTCTCAACAATAAATCCGCACAGGCGTACCAGGGTCGA
GACGTGGACGTTATGAAGGCGGTGGCAGTGGCCTATGCCAACCGATCGCTCAAGGAGTTT
GAGCACGTGCTGGAACTATACAAGGAGGAGGTCCAGGCCGACCCCGTCATCAGAGTGCAC
TTCAACGACCTGTACGACTCGCTGCTGGAGCAGAATCTGCTCAAGGTGATTGAGCCCTTC
AGCTGTGTCGAAATCAACCACATTGCTGAGATCATTGGCCTCGACACCCGACAGGTGGAG
GGCAAGCTGTCTCAGATGATTTTGGATAAGGGCATCAAGGGAGTGTTGGACCAGGGCAAC
GGCTGGCTATTCATCTATGATGAGCCTCAGACAGATAAGACTTACGATTCGGCTCTGGAG
ACCGTCAAACACATGTCCACCGTGGTCGATTTGCTGTACGAGAAGGCCTCTTCTCTCAAC
TAAGCAATGTAAAGTAGCTTAATGAAATGATGAAGATGAGAGGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08976g_CDS-001

Protein length: 421 aa.
Product: Essential, non-ATPase regulatory subunit of the 26S proteasome lid, putative

>YALI0D08976g_CDS-001 MTLEETLASAKTAGDKGNLVEAEKLYREILDQKAGTNEKSIQIQESALINLGTLYASNNK
PQDLADLIHTSLTVMSGFAKSKTAKIIRNLIDLFAKVPSDCIDLQIATTQKCIEWAVSEK
RNFLRQSLQTRLVSLFLEKKTYYDALNLINTLLKELKKLDDKMVLVEVQLLEAKAYHALR
NIPKSRASLTSARTSANAVYCPPLTQAALDTMSGILQADDKDYKTAFSYFYEAFEGYVGQ
ENPKAGTVLKYMLLCKIMLNLADDVETILNNKSAQAYQGRDVDVMKAVAVAYANRSLKEF
EHVLELYKEEVQADPVIRVHFNDLYDSLLEQNLLKVIEPFSCVEINHIAEIIGLDTRQVE
GKLSQMILDKGIKGVLDQGNGWLFIYDEPQTDKTYDSALETVKHMSTVVDLLYEKASSLN
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG