YALI0D08800g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D08800g

Location

Species Yarrowia lipolytica Positions 1125967..1127031
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1065 (nuc.)
Previous locus YALI0D08778g Next locus YALI0D08806r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08800g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08800gYALI0D08800g_mRNA-001YALI0D08800g_CDS-001

Nucleotide sequence

 

>YALI0D08800g
ATGTTGAAACATCCGTGGTGGAAAACGAAACCGAAACTGGCAGCCCGAGGAGAGTCTCTC
AACCGAAGACTCAACAAGAGAACCGACAACTTCTCCAACTCTCTGAGAAACTACCACCAG
CTGTTCATCGGGACCATCAACAACGCTCAGGAGATCACCTTTCCGTCTGCTCTCCACGCT
ACAGATGTGGCTGCCAGGCGCAGGGGGCTCCTTTCCTTCGACGACCTGGGGACGCTGTTC
TACGAAAAGGCAGCCACGGGAGACGACCCCGAAGCTATGGCGCTCGTCTGGCAGCTCTAC
CAGGAGATCCTGGGCTCTTCTGTGGTACTGGCTGCGGAAGCAGCCGTAGGACAACAATAC
AAGAACAGCTGGCAGGAAAACGAAGACAAGATGCACAGTCTCAGATTAGAACTCAACTGT
CGAATGGGAGAGATCCATAGGCTGAGACAGAAGCTTGGGAAAGATGCCGTCTCCTGCGGA
ACGGACTCTAGAGACGTCAAGGTGCTCTTCAATGACAGAAACAAGCCTCTACATATCACC
GTCAGCAAGGATCACATAAGTCTCAGTGAGGCCATTGAATCAGAAGCCTTTAAAACCCAA
CAATCTCCAGAAACTGGTTCCGACTGCTGCACTCTTGATACCAACGGTGGTTCTATCATG
GATAATAGCCCTATGACTCTATCGTCACCCATTTCGATACCCCTTTCTTCCTCAGCGACA
ACAAGAGGTAATGAAAGAGTTCTGAGTGCGCCCGAGCAGCCCAGCTCGTCGCGATACCTT
AGCACCAAGAGATTTCCGTCCCTTGTGAGCCGCCTGACTCGCAGAAAAGTGAGAATCTAC
TCAGAAGTGGACGTGGTTCAACCCGTGTGGTACCCCAAGAGTGGAGGAAGTGTGATGACC
AATGGCAGTGTTAGAACACGATATGAGACCGGCTCAATTGCGCGCTTCAAGGTGAAACTG
AACCCTTCCACGTGTGATACCGTTGGTCAGCAGACAAAAGAGTATCGAGATTGGGCTGTA
GCCAAGGCCGAGAGAAAGTACGGGGAGTTGTTTGTTCCTAGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08800g_CDS-001

Protein length: 355 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D08800g_CDS-001 MLKHPWWKTKPKLAARGESLNRRLNKRTDNFSNSLRNYHQLFIGTINNAQEITFPSALHA
TDVAARRRGLLSFDDLGTLFYEKAATGDDPEAMALVWQLYQEILGSSVVLAAEAAVGQQY
KNSWQENEDKMHSLRLELNCRMGEIHRLRQKLGKDAVSCGTDSRDVKVLFNDRNKPLHIT
VSKDHISLSEAIESEAFKTQQSPETGSDCCTLDTNGGSIMDNSPMTLSSPISIPLSSSAT
TRGNERVLSAPEQPSSSRYLSTKRFPSLVSRLTRRKVRIYSEVDVVQPVWYPKSGGSVMT
NGSVRTRYETGSIARFKVKLNPSTCDTVGQQTKEYRDWAVAKAERKYGELFVPS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG