YALI0D08536g

Overview

Description some similarities with uniprot|P40485 Saccharomyces cerevisiae YIL105C (ohnolog of YNL047C) SLM1 phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p
Locus type CDS
Locus tag YALI0D08536g

Location

Species Yarrowia lipolytica Positions 1095929..1098514
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2586 (nuc.)
Previous locus YALI0D08514g Next locus YALI0D08558g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08536g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08536gYALI0D08536g_mRNA-001YALI0D08536g_CDS-001

Nucleotide sequence

 

>YALI0D08536g
ATGCCCAACTCCCAGCCGCGCCCCCAACTTTACCACAGCAGCGTTCACCTTTCCCTTTCC
CTATCCCACCACCCTGAGCACGACACGGCTGAGAGACTGGTAAGAAAACAGAAGCAGCAA
ATGACCATGGACGCCACAGACACTCTGTCGGTCGCCTACTGCCCCGTGCCCATCAACGGC
AACCCCACCGAGGTGCTGGCCAACCGGTTTTCGGCCTGGCGCAAAATCATCCGAGCCCTG
CTCGTCTACTTCAAGGAGGCGGTTTCGGTCCAAGAGGAGGTCACTCGACAACACGTGCGG
TTGGGCACGGCCGTCAACTTTCCGTTTTTCGCCAACGGCACCGCCGACATGTCCAAGCAT
ACGGTCCAGAAGGATCGCGAGGCCCTGGACCCCCAGGACTCCAACGTGACCGACGCCCGG
TCGGTAGCGGCCAAGTCGACCGCCGGATCGCTGTGGGCAGGCGGCTTCCACCAAAACAGC
ACGTCGCACGAGGACGAGGCAATTCGCGCCATGTTCCAGCCCTACGGCCACGGCTCCATT
GCCGATCTGCCCGGCGACCTCATTGCCTACCACCGAACCCAGGCGGCCCACGCGTCGCAG
CTGGCCAAGGAGCTGGCCAAGAACCTGATCCCTCGGCTCGATGATCTGCGGCGTGACCTG
CTGGTCAAGATCAAGGAGATCAAGGGCCTGTCGTCGGACTTCAAAAACACCTACGCCAAG
GAACAAGGTCTTACCGAGCAGCACGTGGCCTCTCTACAGCAGGCCATCAAGGTGCTGACT
AGCGGGGGACCTCTACAGGGCAAGCAGGACCCGGCACTGGTGCGGTACCAGCTCGAGAAG
CAGCTGGGACGGCAAATCTCAGAGGAAAACTACCTGCAGGACGCGTACAACAACCTGCAA
AACAGCGGCAAGGAGCTGGAGAAGGTGGTGGTCATGGAGATCCAGCAGGCTCTCGACCAC
TTTGCGCAGCTCAATTCGGCTGCTGCCACGGCTCTACAGCAGCTGGTGGACAAGTTTGTT
GTCGACGGCTTTGTGGCTCGAGAGCCCGCAGCCGAGTGGACCGCCTTTGTGTCTACTGAC
CCCAACTTTGTCGATACTGCTACTCCCTCTCGATCTATCGACGAGATTGAGTACCCCTAC
CGAGGCGATCCTCTCACCTGCGAGCTGCGATCGGGCCAGCTGGAGCGACGGTCCAAGTAC
CTCAAGAGCTACAGCCGGGCCTTCTACGTGTTGACCCCGTCATTTCTGCACGAGTTCAAG
AGCGGCGATCGGGCCAAACACCCCGTACCGGTTATGTCTCTGGCGCTGGACGAGTGCCAG
ATTTCGGCCGACTCCAAGTCGTCCAGCGGGTCGCACAAGTTTGTGCTCAAGACCAAGCAG
GGCGACTCGTCGCGGGGCCACAATTGGGTATTCCGGGTCGAGTCTGCTGACGCTCTGCAA
CAGTGGATGAAGGACATCCAGACCCTCACCTCGATTAAGGATGTGCGTGCACGAGCTCTA
AAGTTTAATGCCCCTAGGGTTGCTCCATCACGGCAGCAGGTTAATGGCCACAGCAACAGT
AACCAGCACAACCATACTGAAGTGAACAACGCAGTCCCAGCTAACATCAACAACGTTGAC
TCTGCACACAACGCTTCCACACACAGCAACGCATCCAACGCCATCCCCACAGGAATTGCC
ACCGCAACAGCAACCGCAACCGCAACCGCCTACCCCAACGACACAAACACCACTATCGCC
ACCGACCCAGTAGCCGATAGTGTCGACAACAACAACCCCCTGCCCACGTCTGCCGACTCC
GAAATCCCTGCCCTACCCCATTCAGCTCGCGAAATGAGTGGATCTCTCCTGGCCTCGGCC
CATCGAAAACACATGGAAGAGCCCCAGCAGGTGTTCGACGAACCCGACGAGTTCGAAAGC
CCAAGCGAAGCCACCAAGCAGGACCCTCTGGTCGACGAAAAGTCCAACTTTGGTTACGAC
AACCCTCGAAACAGAACCATTGACGACTACGAGGAAAACCAGCATGTAGGCGAGGTGCCC
CGGGTGCAGTCGCGACAAAACTCTCGAAAGTTCTCCGTCGACCAGGGCCCCGCCCTGCCC
GGTCTGGCCGAGATCAAGGCTGCCCAGGCTGCCGCAGGAGCCGACTCGGACGTGTTTGAG
TACGACAACGAGAACCCCGACGCCGGCAACACTCTCAAGACCGAAAAGGACGAGTTTGTG
CCTGCCCACTCCGATCTGCCCGTCCATGTCGAGCGACGGCTCACCATGTCCAACCACAAG
GAGGACGGGGACGCTGCCCAGAATGCCCCTCGAGACCACACCGAGGTGGGCGCTGATGCC
CACGACGTGATCGAGCGACAGAGAAAGTACTCTGTGTCGTCCACGGGCAAGCGAGGCCCT
CCCTCTCGAAAAGCCACGGGATCCTACGGCACTACTGATGACCTCAAGCCTTTGTCCGAG
GCTCAGCCCGCCGACGGCAAGGGCTCTCTGTTCTTTGCCAACGGTCTTCCTGACACCACT
TCTGGTGCTAAATAAATACAATAGGTACTTAGTTAATGAACGTATGACGTGTATTTTAGA
ACATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08536g_CDS-001

Protein length: 845 aa.
Product: Conserved hypothetical protein

>YALI0D08536g_CDS-001 MPNSQPRPQLYHSSVHLSLSLSHHPEHDTAERLVRKQKQQMTMDATDTLSVAYCPVPING
NPTEVLANRFSAWRKIIRALLVYFKEAVSVQEEVTRQHVRLGTAVNFPFFANGTADMSKH
TVQKDREALDPQDSNVTDARSVAAKSTAGSLWAGGFHQNSTSHEDEAIRAMFQPYGHGSI
ADLPGDLIAYHRTQAAHASQLAKELAKNLIPRLDDLRRDLLVKIKEIKGLSSDFKNTYAK
EQGLTEQHVASLQQAIKVLTSGGPLQGKQDPALVRYQLEKQLGRQISEENYLQDAYNNLQ
NSGKELEKVVVMEIQQALDHFAQLNSAAATALQQLVDKFVVDGFVAREPAAEWTAFVSTD
PNFVDTATPSRSIDEIEYPYRGDPLTCELRSGQLERRSKYLKSYSRAFYVLTPSFLHEFK
SGDRAKHPVPVMSLALDECQISADSKSSSGSHKFVLKTKQGDSSRGHNWVFRVESADALQ
QWMKDIQTLTSIKDVRARALKFNAPRVAPSRQQVNGHSNSNQHNHTEVNNAVPANINNVD
SAHNASTHSNASNAIPTGIATATATATATAYPNDTNTTIATDPVADSVDNNNPLPTSADS
EIPALPHSAREMSGSLLASAHRKHMEEPQQVFDEPDEFESPSEATKQDPLVDEKSNFGYD
NPRNRTIDDYEENQHVGEVPRVQSRQNSRKFSVDQGPALPGLAEIKAAQAAAGADSDVFE
YDNENPDAGNTLKTEKDEFVPAHSDLPVHVERRLTMSNHKEDGDAAQNAPRDHTEVGADA
HDVIERQRKYSVSSTGKRGPPSRKATGSYGTTDDLKPLSEAQPADGKGSLFFANGLPDTT
SGAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG