YALI0D08206g

Overview

Description similar to uniprot|Q08108 Saccharomyces cerevisiae YOL011W (ohnolog of YMR008C) PLB3 phospholipase B (lysophospholipase)
Locus type CDS
Locus tag YALI0D08206g

Location

Species Yarrowia lipolytica Positions 1047475..1049295
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1821 (nuc.)
Previous locus YALI0D08184g Next locus YALI0D08228g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08206g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08206gYALI0D08206g_mRNA-001YALI0D08206g_CDS-001

Nucleotide sequence

 

>YALI0D08206g
ATGAAGTTCTCGGCTACCATTCTGACCGCCCTGGCAGCCTCGGCGGTTGCCAACTACGCC
CCCATCAAGGTGGAGTGTCCAAAAGATGTCAACATCTCCCGACCAGCAGACGGCCTGAGC
CACCAGGAGGCCGACTACATCAATGAACGACACAAAAAGACCTCCAAGGCGCTCAGAGAG
TACCTCGGTGGGCTCGACATCAAGGCCCGAGGCAACAACACCTTCGACACGGACTCTTTT
CTGAACGAAACCTCCCCCAAGCTCGCCATTGCGGCTGCCGGAGGAGGTTTCCGGGCCATG
CTGGTTGGAGCAGGCGTCATTGCTGCCCTGGACAAGCGTGTGGACGAAAACAACAAGAAC
GGAGGCTTTCTGCAGTCCGCAGACTATCTGGCCGGTTTGTCTGGAGGAGCTTGGCTCGTG
GGATCTCTGGTCCTCAACGACTGGCCTACTGTGCCTGAGATCCAGGCTGACCCCCAAATC
TGGTACCTCAACAAGTCCTTGGTGGGCTCAGTCGAACCCGGATCCATGAACACCGTCGGC
CTCTTCGCCAAGGTGCTTGCAGATACCACCTCCAAGCTTGCTGCCGGCTACCAGACCTCG
CTGACCGACCAATGGGGACGACTGGTGTCATACCAGACCATCAACTCTTCGCACACCAAG
GGCGGTCTGGATGCCACCGAGGTGACCTGGTCTGGCATCAGAAACATCTCCTCTTTCGTT
GACCATGAAATGCCCTTTCCCATCATTCTGGGCACATCTCTTTTCCCCGGAACTTCTCAC
GATGTTGACCAGATTAAATTCAACAACTCCATCATCGAAATGACCCCCTACGAGTGGGGA
ACCTGGGACAAGAACATCCGGCAATTTGTCGACACCGAGTACCTGGGTACCGAGATGTCC
GACGGAAAGCCCACAGGAAACTGTACCCGACGATACGATAACGCCGGCTTCCTGATGGGA
ACCTCCTCCTCAATTTTCAACATGGACATGAAGACTCTGGGCTTTGGCGGCTTTGAGAGC
GTGCTACTGCAGGATCTCTTCTCCGCTCTGGATATTGTCAACGAGGGCTCTTTCAACGTG
GCTGTTTACAACCCCAACCCTTTCTACCAACAGGTTGGCATGCAGACCAATCAGACCATC
TCCAAGGCTCTGTACGTGTGTGACGGAGGTTTCGACAAGGAGACCATTCCCATTCTGCCT
TTCCTTCAGCCCGAGAGAGAGGTCGATGTTGTCATTGCCATCGACCCTTCCACTGATACT
GAGGAAAGCTGGCCCGATGGAGAGTCTCTTCGAGCCACCCAGAACAAGTCCGACTGGGAG
TTTGGAGACGACGTGTTTCCCAAGATCCCCTCTAACGAGACCTTCATCAGCAAGAATCTG
ACTACCAAGCCTGTCTTCTTCGGCTGCAACACCACCAATCTCAAGACGTACAAGGACTCG
GATCGATACTCTCCCGTCATTGTCTACGTGCCCATGTCTGACATCACCTACCCCTCCAAC
TTCTCCACCGGCAAGCTGTCCTACACCAACGAGGAACAGCAGCGAACCATCAACAACGGC
TACAACATGATGACTCGAAGCAACGGAACCGAGGATTCCAACTGGGACAAGTGTCTGGGC
TGTGTGACTCTGCTGCGAGAGTTCCAGCGACGGGACTCGGATGTTCCCAATGACTGTGAG
CAGTGTTTCTCCGACTACTGTTACAACTAACCCTTCTCGCTCTCGTTTTCACTTTTGACA
ACATTTAATTTCTAATTTCACATCGCATCTGGAATGTAATTATGTATAGATTCATAACCA
GTAATATACTAGTTTATATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08206g_CDS-001

Protein length: 570 aa.
Product: Phospholipase B (lysophospholipase) involved in lipid metabolism, putative

>YALI0D08206g_CDS-001 MKFSATILTALAASAVANYAPIKVECPKDVNISRPADGLSHQEADYINERHKKTSKALRE
YLGGLDIKARGNNTFDTDSFLNETSPKLAIAAAGGGFRAMLVGAGVIAALDKRVDENNKN
GGFLQSADYLAGLSGGAWLVGSLVLNDWPTVPEIQADPQIWYLNKSLVGSVEPGSMNTVG
LFAKVLADTTSKLAAGYQTSLTDQWGRLVSYQTINSSHTKGGLDATEVTWSGIRNISSFV
DHEMPFPIILGTSLFPGTSHDVDQIKFNNSIIEMTPYEWGTWDKNIRQFVDTEYLGTEMS
DGKPTGNCTRRYDNAGFLMGTSSSIFNMDMKTLGFGGFESVLLQDLFSALDIVNEGSFNV
AVYNPNPFYQQVGMQTNQTISKALYVCDGGFDKETIPILPFLQPEREVDVVIAIDPSTDT
EESWPDGESLRATQNKSDWEFGDDVFPKIPSNETFISKNLTTKPVFFGCNTTNLKTYKDS
DRYSPVIVYVPMSDITYPSNFSTGKLSYTNEEQQRTINNGYNMMTRSNGTEDSNWDKCLG
CVTLLREFQRRDSDVPNDCEQCFSDYCYN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG