YALI0D08052g

Overview

Description similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y, serine-type protease
Locus type CDS
Locus tag YALI0D08052g

Location

Species Yarrowia lipolytica Positions 1028689..1030162
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1474 (nuc.)
Previous locus YALI0D08008r Next locus YALI0D08074r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08052g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08052gYALI0D08052g_mRNA-001YALI0D08052g_CDS-001

Nucleotide sequence

 

>YALI0D08052g
ATGCGCGTGCTCTATAACATTGTCGCTGGTCTCCGAGCCGTTTCTGCTCTTCGGCAATTC
GAGCAAGAGCCACTACACCAAGTCTACGATGGAATCAAGGATGTGGCTCGTCAGCAGGTT
TCAGATGGCACATTTCGGGTCACTGATCCCGCAGAGCTAGGAGTGGATTCCGTCAAGCAA
CATTCAGGCTACTTTGATTTCGAACAGAATAACAAACACCTGTTTTTCTGGTTCTTTGAG
TCGCGAAACGACCCCAAAACGGACCCTGTAGTCCTGTGGATCAACGGAGGACCCGGTTGT
TCTTCCATAAAGGGCATGTTCTTTGAGATGGGCTCAGCAAAGGTCGAACCCGAGCTCAAA
CTTGTGGACAATCCCTACGCATGGAATTCAAACGCCTCCGTCATCTACCTCGATCAGCCG
GTGAATACTGGCTACTCATACTCCTCAGATGAACACAGAGTCAACTCCACCAGACAAGCA
GCCAAGGACGTGCATCGGTTTCTAAACAAGTTCTTTGAAGTTTACCCCGAATACGCCGAG
CTGGATTTCCACGTGGCTGGAGAGTCGTATGCTGGCCATTACATTCCTGCTATCGCTACC
GAGATCCAAAGTCACAAGGAGAAGAACTACGAGTTGGCCTCGGTGCTGATTGGAAACGGA
GTCACAGACACAAAGACCCAGGTGCCCTACTTCCAGGCCATGGCTTGTGGAGAGGGAGGA
TACCCTTCTGTTCTGTCCGAAGACACCTGCCAGCAGATGAAGGATGCCGTTGGAGACTGC
CAGAAGCTCATTGAACACTGCTGGGAAAACCCCAAGAACAAGCTGCAGTGCTACGCCACA
ATGAACTACTGTCTCTCTGTTTCTGTCGAGCCCTACATGCGTGAAGGAGGACGAAATGCT
TACGATATCCGAGACGTGTGCTCCAAGACTGGCTGTTACGAGGACGAGAACATTGCCATT
GAGTCTTACCTCAACGATGAACATGTCCAGACTGTTCTTGGTGTCAAGGATATCGAGCAT
GTTGGATGTAGAGGCTCTGTTGGCAACGAGTTCGGCCTCAACGGCGACTACGAGCTGCCC
TTTCAGTACGATGTGGCTGATCTTCTCGACAGTGGTCTTCCAGTTCTGCTCTACTCCGGT
GACAAGGATTTCCGATGCAACTGGCTAGGAAACAAGGCATGGTCTGACAAACTGGAGTGG
AAGGGAGCCAAGGAGTATTCCGAAGCTCCTATCAAGAGATGGCATGCCAACGTTGACGGT
AAGGACATTGCTGCTGGCGAGGTGAAGCAGTCCGGCGAGCTGACCTTCCTACGAGTGTTT
GATGCTGGCCATATGGTTCCTCACGATCAGCCTGAGACATCTCTCGATATGCTCAACAGG
TGGATTTCTGGGGGCTCTTTTGAGTAGCCTATGGGATCTTTCATTGCTCTTGTAATTCCA
TAGATAATATATACGAAACGCATTAGAAGTAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08052g_CDS-001

Protein length: 469 aa.
Product: Vacuolar carboxypeptidase Y (proteinase C, CPY), putative

>YALI0D08052g_CDS-001 MRVLYNIVAGLRAVSALRQFEQEPLHQVYDGIKDVARQQVSDGTFRVTDPAELGVDSVKQ
HSGYFDFEQNNKHLFFWFFESRNDPKTDPVVLWINGGPGCSSIKGMFFEMGSAKVEPELK
LVDNPYAWNSNASVIYLDQPVNTGYSYSSDEHRVNSTRQAAKDVHRFLNKFFEVYPEYAE
LDFHVAGESYAGHYIPAIATEIQSHKEKNYELASVLIGNGVTDTKTQVPYFQAMACGEGG
YPSVLSEDTCQQMKDAVGDCQKLIEHCWENPKNKLQCYATMNYCLSVSVEPYMREGGRNA
YDIRDVCSKTGCYEDENIAIESYLNDEHVQTVLGVKDIEHVGCRGSVGNEFGLNGDYELP
FQYDVADLLDSGLPVLLYSGDKDFRCNWLGNKAWSDKLEWKGAKEYSEAPIKRWHANVDG
KDIAAGEVKQSGELTFLRVFDAGHMVPHDQPETSLDMLNRWISGGSFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG