YALI0D07546g

Overview

Description some similarities with uniprot|Q8PCT1 Xanthomonas campestris DNA repair system specific for alkylated DNA
Locus type CDS
Locus tag YALI0D07546g

Location

Species Yarrowia lipolytica Positions 976432..977619
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1188 (nuc.)
Previous locus YALI0D07535g Next locus YALI0D07568g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07546g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07546gYALI0D07546g_mRNA-001YALI0D07546g_CDS-001

Nucleotide sequence

 

>YALI0D07546g
ATGTCTACAACATCTCTGCTTCGAAAACTGCAGAAAGAATACCCGCTGGCGTCTCGAGAA
GTGCTACTGGATATTCTCGTGTCTTGTAATGGAGATGTCGATTCTGCGAAAGAGCTTTTG
GGACAGTCACAGACACCTACCAAAGATACCACAAGTACTCGTCCTATAGATAGTCCCAAA
AGACAGGCTTCCATAGCCATTTTTGGTGTCAAAAAGAGGAAGAAAGAAAGTGAAGCGAAT
ACAACTTGTTCATCGTCTCCAAACACCCTGAAACCCCTCACATTATATACCCCTGAAGAT
ATCGAGGCTGCCTTACCGTGCAGTTTGATCTACAATGTGTTGGAAAAGGCAGAAGCTGAA
AATCTACTAGACCAGCTTATGGAGGATCACAATAGCTGGAAAGAAAAAACCAAGTTCTAC
CTATTTGACAAACTGTGTGAAACCCCCCACAAGTCTGCCTTTTACACTAAAGACATGTCC
GTGTACTCGCAACACACTTATCGATACAATGGAAAGCCTGTCGACACTTCCAGAAAGTAC
AGCAAGGCCATGGAGGCGTGTTCAGATCGAATTCAGGAGCTAGTACGCAGTACAAACAAG
GAAGGGACCGCAGAGTGGCTTAGTGACGCGTGTATTGCCAACTATTATGCTGACGAGTCT
CAATCTGTGGGGTTTCATAGTGATCAATTGACGTATATAGGGCCGCGTCCTGTCATTGCC
GCGTTAACTCTGGGATCCGAGCGCATCTTCAGACTAAAAGGGGCTTGTCCGGATGGGGAT
AGACGGACCTACAACATTCTGTTACCGCATAATTCTCTCATGATCATGCATGCCGGGTGC
CAGGAGGCCTACAAACATAGTATCATTCCCGTTCAAGCCAAACAGATTGGATTACATGAG
AGGGCAGGCAAGGTGCGTTTCTCTCTCACGTTTCGACACTACAAGAAGGAGTTTACGCCC
AACAAGATTCCACAATGCAAGTGCGGAGAGCCGATGATTCTGAAGCCGGTGTTCAAGAAA
GCTGCTGGACAGAAAAGCGGGTACTTTTGGACCTGTGGCCAGACATACCAGGGCAAGGGA
TGTGGAGATTTTGTGTGGTATGACAAACCCATTAGGTGATAGTTATCAGGATTGGTGTTG
CGTGTACAACAGGTGTAAGCGGATGAATGGATAGTGTATTCGTCTTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07546g_CDS-001

Protein length: 373 aa.
Product: Conserved hypothetical protein

>YALI0D07546g_CDS-001 MSTTSLLRKLQKEYPLASREVLLDILVSCNGDVDSAKELLGQSQTPTKDTTSTRPIDSPK
RQASIAIFGVKKRKKESEANTTCSSSPNTLKPLTLYTPEDIEAALPCSLIYNVLEKAEAE
NLLDQLMEDHNSWKEKTKFYLFDKLCETPHKSAFYTKDMSVYSQHTYRYNGKPVDTSRKY
SKAMEACSDRIQELVRSTNKEGTAEWLSDACIANYYADESQSVGFHSDQLTYIGPRPVIA
ALTLGSERIFRLKGACPDGDRRTYNILLPHNSLMIMHAGCQEAYKHSIIPVQAKQIGLHE
RAGKVRFSLTFRHYKKEFTPNKIPQCKCGEPMILKPVFKKAAGQKSGYFWTCGQTYQGKG
CGDFVWYDKPIR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG