YALI0D07392g

Overview

Description similar to uniprot|P53099 Saccharomyces cerevisiae YGL186c
Locus type CDS
Locus tag YALI0D07392g

Location

Species Yarrowia lipolytica Positions 943423..945084
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1662 (nuc.)
Previous locus YALI0D07370g Next locus YALI0D07414g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07392g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07392gYALI0D07392g_mRNA-001YALI0D07392g_CDS-001

Nucleotide sequence

 

>YALI0D07392g
ATGAGTCACTACCACGACAAAAACGATATCTCCACTTTTGTGGAGTCGGGTTCTACCAGA
CCCGTGTCCGCCAGCTCCCTAGACTCTTCTATCCGTCCCCAGTTCCCCGAATCCCATCTC
TATGACGACGAAAAGCCTTCTCCAGATGTGTCTGTACACTCGCTGCCCAGAGACACATGG
TTCGAGAAGTTCATCTACTACTCGTCTAAGGTCGACTCTCTAGGTGTGGAGCTCCGGGGT
ATCCAGCGTATCCCTCTGGATGAACGAAAGAAGGCCGATACCAAGGCGTTTATCGACATC
TCGCTGTTTTGGATCTGTGCCTGCGGAGGTCTGACATCCATGCAGGGCATGATGCTTGGT
CCCCTGGCCTTTGGACTGTCTCTGAAGGACTCCCTGGTGTCCGGTCTACTCGGTGTGTTT
CTGGGATCCGGAGTGGCAGCCTATGGAGCTACTTTCGGACCCCGTTCGGGACTCAGACAG
CTTGTGGGAGCCCGAATCTTTGCCGGCTGGTGGCCCACCAAGGTGTTTGCCCTGCTGTCC
ATCATTGGAGGCCTGGGATGGTCAATTGTCAACTGCGTGGTCGGAGGACAAGTTCTGGGC
TCCGTGAGTGATGGAAAAGTGCCCCTAGAGGTCGGTATCACCATTGTCACCGTCGTCTCT
TTCTTCACGGCCGTATTTGGAGTCCGAGCAGTCATGTGGTTCGAAAAGGTGTTTGCGATC
CCACTCAACGTGGTCTTCCTGCTGCTCTACGTCTGTTCCCACAGCTATTACGACGTGCAC
GCCAAGAGCCAGGGCACCCATCTAACCATTGCCGGCAACTGGCTGTCCAACTTTGCTGCC
TGCTTCGGAATCACAAACACCTGGATGCCTTTGGCAGCAGACTACTACGCCCAATACTCA
CCGTCGGTCAAAAACTGGAAGATTGTCACCGTCACCTGGCTGTCCATCTTCATTCCCTCG
GCCTTTGTAGGTGTTCTGGGCACTCTTCTGTCCACTGGAGTTAATACCAACACGGAATGG
GCCGCTATCCACGACAAGTGGGGCAACGGAGGACTCATCACCGCTGGATTTGCCAAATGG
AAGGGCGGAGGAAAGTTCCTCGTCGTTCTTCTCTTCATTTCCATCATCTGCAACAACATC
CTCAACACTTACTCCTTTGCACTATCCATCCAAACCTGGGGACGAGCCGTCATGAGAGTC
CCCCGGTGGTTCTGGTCGTTCATCTGTTGCTGTATCTACTTTGGATGTTCCATGGGAGGA
CGATACAAGCTGTCCGAGTACCTCAACAACTTTCTGCCCATGATCGGCTACTGGGCCCAC
ATCTTCTTTCTGCTCATTCTGCTGGAACAGATCCTCTTCCGACGAAAGAAGCTGCCCGTG
GAACCCGGACATGAGGACGAAAACGACCCCTACTACAGATGGTACCTGTGGGACTCGCCC
GAGAGACTGCCCCACGGAATCGCGGCCTTCTGCTCCTTTCTTCTGGGAGCCACAGGAGCC
GTTCTGGGTATGTCTCAGGTCTACTTCCAAGGCCCAATCGCCAAACATGTTGGTGCCTAT
GGAGCTGATCTGGGTCTTGAAGCTATCACCTTCTTTGTTTGTATCAGCTACCCGATATTC
AGATACCTCGAGGCGAAAAGGTGGCCCGAGCGGTTTGCTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07392g_CDS-001

Protein length: 554 aa.
Product: Plasma membrane pyridoxine (vitamin B6) transporter, putative

>YALI0D07392g_CDS-001 MSHYHDKNDISTFVESGSTRPVSASSLDSSIRPQFPESHLYDDEKPSPDVSVHSLPRDTW
FEKFIYYSSKVDSLGVELRGIQRIPLDERKKADTKAFIDISLFWICACGGLTSMQGMMLG
PLAFGLSLKDSLVSGLLGVFLGSGVAAYGATFGPRSGLRQLVGARIFAGWWPTKVFALLS
IIGGLGWSIVNCVVGGQVLGSVSDGKVPLEVGITIVTVVSFFTAVFGVRAVMWFEKVFAI
PLNVVFLLLYVCSHSYYDVHAKSQGTHLTIAGNWLSNFAACFGITNTWMPLAADYYAQYS
PSVKNWKIVTVTWLSIFIPSAFVGVLGTLLSTGVNTNTEWAAIHDKWGNGGLITAGFAKW
KGGGKFLVVLLFISIICNNILNTYSFALSIQTWGRAVMRVPRWFWSFICCCIYFGCSMGG
RYKLSEYLNNFLPMIGYWAHIFFLLILLEQILFRRKKLPVEPGHEDENDPYYRWYLWDSP
ERLPHGIAAFCSFLLGATGAVLGMSQVYFQGPIAKHVGAYGADLGLEAITFFVCISYPIF
RYLEAKRWPERFA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG