YALI0D07260g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D07260g

Location

Species Yarrowia lipolytica Positions 922465..923631
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1167 (nuc.)
Previous locus YALI0D07238g Next locus YALI0D07282g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07260g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07260gYALI0D07260g_mRNA-001YALI0D07260g_CDS-001

Nucleotide sequence

 

>YALI0D07260g
ATGGGCAGCCTGCTGGAACAACTCCCTCCAGAGGTCTACGCCTCCGTCCTCGATAATCTC
TCACCACGTGATGTACTACGGCTACGCAAATCCTCCCGCGCCATTCTCGACATGTCCGAA
GACTATGCTACTGCCGCCACAAGAGTAGTTCGCTGCTCCATCGAACCAACTCATGCAGCC
TGCTGTACCCTGGCCAAGCTGGACAAGTACCGCGAGTGGGACATTCTGGACGCCCGCAAA
GCCCCCATCAACAGTGAAGATCTTCTACACGCCGAAAAAGCCAGCGTGGCGTATCTGGCG
CTCATTATCCCGGGTCTTCTGATGCCGTTTGTGGTGCGCAGAGAGAGCCGAAGACAGCTG
GATCGAACGGACCTACAAACGCTCAGAATAGCCTACATTCAGTACCGAGACGTGTGGAAG
GCCACGGGACAGAGATACATTGAATATCAGGAAGGAGGACTCAGCATCCTTAAGGGATCT
ACCGTGAGACAGGATGAAACGTTCAAAACGGTGAAGATACCACCCCATCCGGTCCCGAGA
ATGCTGGAAATGAATCCGCACATCCCAGACTACTACCATGCGCAGACTGTGGCTCTCAGG
TTCAACTCAGAGCTCAATAGTCTCGGTGACCTGATTTTGTTGCATTCGAAAACAGAACAT
AACACAGACGAAAACATGCTGAGCCATCTGTTTTGGCAGGAACACAATTCCGGCAAAATG
TTCTCCATGCTGACTATTGTGCACGTGCCTGAACTGGGCAGTATCATTCGAGAGGCCTAC
TTTTGGAACAATAAGGTGTTTTTGTTCTGCGAAAACTACTTCATGGAGGCGGAGATCGTG
GGCGCCAAGGGTGCTCGGCTGGTGGTAGACAAGCTTGCTGGAACGTACCACACGGACATT
GCGGCTTCTCAGGACCATGCCGTGTCTCCCGCTGATACGCAAGTGAGATACATTAGTGAA
GGAAAAGTTCTTCTGGGAGACTATCGAGTGTTGGATCTAGATAGACAGACTGTGAGCCAT
AGAGAGCCATGGGTCCCGAGAGACAAGCAGGGATTTTACGTGGACTTGCCTGTTAGGTAT
GGCAATGAAAGATTTGCTGCTGGCTAAACAGCGCACTTGAAAAGATGCATAGTATATACA
ATATAGATTAATGATTCATGACTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07260g_CDS-001

Protein length: 369 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D07260g_CDS-001 MGSLLEQLPPEVYASVLDNLSPRDVLRLRKSSRAILDMSEDYATAATRVVRCSIEPTHAA
CCTLAKLDKYREWDILDARKAPINSEDLLHAEKASVAYLALIIPGLLMPFVVRRESRRQL
DRTDLQTLRIAYIQYRDVWKATGQRYIEYQEGGLSILKGSTVRQDETFKTVKIPPHPVPR
MLEMNPHIPDYYHAQTVALRFNSELNSLGDLILLHSKTEHNTDENMLSHLFWQEHNSGKM
FSMLTIVHVPELGSIIREAYFWNNKVFLFCENYFMEAEIVGAKGARLVVDKLAGTYHTDI
AASQDHAVSPADTQVRYISEGKVLLGDYRVLDLDRQTVSHREPWVPRDKQGFYVDLPVRY
GNERFAAG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG